Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1997 ATGGCATTGGAAGAAGATCACCCAACAACAACACTTCTCAAGCTCCAGTCAGCATGTTCCGACCTAAAAACCCTCCTTCGAGCCTCCGAGGAAACACAAGACAACCTGGGAAACACAGACTCAAGGTTTCATCTCTTACAAGGCTCACTCTCCACAGCCTCCAGAGGAATCGCCCCTTTACAATCCCTAGCCATGTCCAGGAAAGCCCTCGACACGAGAATCACCAGAGCCTTGTCCCCAGCACTTACACTCCTCAACACCTTCAAGTTCACAGAGTCTCTCCAGAACAGCCTCGTCGTGCTCTCGACCAAGCTGTCCTCGGAGAAGCCGCATCATGTGCGGCGTCTCCAGAGGCTTCTGGAGTACACCGAGTGCGTGGATCAACTGAACGAGGGTTTAAACAACATAAGCGATGAGGTGGAGGTGGTGATCATGAAACTTCAGGAGGTGGTGGAGTTCATAAGCCGGACGAAGGCGGCGGATCAGTACAGGGAGGCGAGGCTGAGGGAGGCGCTGGGGACGCTGAAGGGGCTGTATGAGATTGAGGTGGATGAGATGAGGTTTCAGGGTTTGCTGGATCAGGCGTTGGTGCATGTGCAGGATGAGTTTGAAGGGTTGTTGCTGAGGATCAAGCATAGGAATTTCGGGGATTTGGTGCACCAACATGGTGATGATTTCAGGGAATTGGGGTCTGAACTGGAAATTCAAGTCCTCAGGAAAATTTCAACCACTCTTGCTGCCAATGATTGCCTAGACATATGCATTGATATATACGTCAAGGCGAGATATAGAAGGGCAGCGAAGGCACTAATGAAGCTAAACCCCGATTACCTGCGAACATACACCCCAGAAGGAATCGACGAAATGGAGTGGGAAACCTTAGAGACAGCCATAACCCTTTGGATCCAACACTTGGAAGTCGCAGTGAAGAAAGTCCTTGTTGCGGAAAAGAAACTCTGCGAAAGAGTCTTGGGCGATTTCATGGAGGGACTAATCTGGCCAGAATGCTTCATTAAGATCTCCGACAAGATCATGGCCGTCTTCTTCCGCTTCGGCGAAGGCGTTGCCCGGAGCAACAAAGAGCCCCAGAAGCTCTTCAAACTCTTGGACATGTTCGAGTCCTTGGAGAAACTCAAACCCGACATGTCACAAATATTCGAAGGCGAATCTGGTGTAGACATATGCACAAGGTTCCGCGAGTTGGAGAAGCTCATCATCGATGCTTCGAGCAAAGTTTTCTTGGAATTGGGTCTCCAAATCGAAGGCAACATCGACGGTCTTCCACCCCCTCAAGACGGTTCCGTTCCAAAACTCGTAAGATACGCTATCAACTATCTCAAATACCTCACCACGGTTAATTATAGAACATCAATGGCTAAGGTTCTCCGAACACAACAAACATGGAAAGATAGTAGTAGTAGTAGCAATGACATGTCTTCGGACGAGGGTTTGTTGAAGCATGCAATTAGCAATGTCATGGATGCGCTGCAACGGAACATTGAGGCAAAGCGTTTGTGTTGCAGGGACAAGGTTTTGGTGCATGTTTTCACGATGAATACTTATTGGTACATTTACATGAGGACGAAGAATACGGAGCTTGGTGAGGTGTTGGGTGAGAAGTTCATGAAAGAAGGTTACAAGGCTGTGGCGGAGGAAAGTGCTTACTTGTATCAGAAGCAAGCGTGGGGGGGTTTGGTTAGGGTTTTGGATGGAGATGATGTGAGGGAGGAAGGGAAAGGGAGTGTGGGAAGAGTGGTGAGTGAAAAGATTGAGGCTTTTTTCAAGGGTTTGAATGAGGTTTGTGAGAGGCATGTTAGAGGGGTGTATAGTATACCTGATGTTGATTTGAGGGAACAAATGAGGGAAGCAACAGTGAGGCTTGTGGTGCCTGTTTATGCTGAGTTTTTGGAGGGTTATTCGGGGTTGTTGCAGAGGAAAGGGTACCCGAGTGTTGAGAGGGTGAATGGGTTGGTGGGGAAGGCTTTTGATGGAGGAAAGCTGAAGGGAAGAGGTTCTGCTTCTAGTGATTGGAATGTTGCAAGGAATTCTGGGTCTCTGGAGAGGGATGTTGTTAGATCACGCAACGATGGTGGTGGTGATGTTTGA 2106 0.4872 MALEEDHPTTTLLKLQSACSDLKTLLRASEETQDNLGNTDSRFHLLQGSLSTASRGIAPLQSLAMSRKALDTRITRALSPALTLLNTFKFTESLQNSLVVLSTKLSSEKPHHVRRLQRLLEYTECVDQLNEGLNNISDEVEVVIMKLQEVVEFISRTKAADQYREARLREALGTLKGLYEIEVDEMRFQGLLDQALVHVQDEFEGLLLRIKHRNFGDLVHQHGDDFRELGSELEIQVLRKISTTLAANDCLDICIDIYVKARYRRAAKALMKLNPDYLRTYTPEGIDEMEWETLETAITLWIQHLEVAVKKVLVAEKKLCERVLGDFMEGLIWPECFIKISDKIMAVFFRFGEGVARSNKEPQKLFKLLDMFESLEKLKPDMSQIFEGESGVDICTRFRELEKLIIDASSKVFLELGLQIEGNIDGLPPPQDGSVPKLVRYAINYLKYLTTVNYRTSMAKVLRTQQTWKDSSSSSNDMSSDEGLLKHAISNVMDALQRNIEAKRLCCRDKVLVHVFTMNTYWYIYMRTKNTELGEVLGEKFMKEGYKAVAEESAYLYQKQAWGGLVRVLDGDDVREEGKGSVGRVVSEKIEAFFKGLNEVCERHVRGVYSIPDVDLREQMREATVRLVVPVYAEFLEGYSGLLQRKGYPSVERVNGLVGKAFDGGKLKGRGSASSDWNVARNSGSLERDVVRSRNDGGGDV* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1997 701 PANTHER EXOCYST COMPLEX PROTEIN EXO70 10 664 IPR004140 GO:0000145|GO:0006887
Gso17g1997 701 MobiDBLite consensus disorder prediction 669 701 - -
Gso17g1997 701 Gene3D Exocyst complex component Exo70 166 668 - -
Gso17g1997 701 PANTHER OS08G0519900 PROTEIN 10 664 - -
Gso17g1997 701 MobiDBLite consensus disorder prediction 687 701 - -
Gso17g1997 701 SUPERFAMILY Cullin repeat-like 167 643 IPR016159 -
Gso17g1997 701 Pfam Exo70 exocyst complex subunit 301 643 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1997 Gso-Chr17 39326978 39330376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1997 15 650 EXO70 exocyst subunit family AT4G31540 29.160 5.86e-76 256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0771 14 8122710 8125600 Gso17g1997 17 39326978 39330376 GST