Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1242 ATGTTATTAGTGTTGTCTACCATTCATTTCACATTTTTCACTTTGCACTCCGAAGAGAGGATGAGAGTTCCCAATTGTTCATCATTCTTCACTCTACCCCTACGTCATTTCATTACCTTAGCAAACACATTGGGTTTCATTCTCTTGATCTTGTTCATATCTGGGATCATTGAGTTCCCCTCTTTTTCTTTATTATCACAATTCTCAACCCAACCAATCAAAGACCAATCAAAGGCTTTCACCGACGTGGTTGGTGCATTCAAAAAGTGGGACTCCGAAGTGGGGTGTGCCCGATTCAAGAAAGAGATAAACCAACAAAGAAATGGTTCAAATTATGGTTTTTCTACTTCTTTGCAAGATCAATTTGGTGGCCAATTGGAATGTGGGGTGCTGAAAATGAAACATGTGAGCATCTTGGTGAAAGGGTGGACATGGATTCCTGACAATTTAAATAACATGTACATTTGCCCATGTGGATTGAGTTGCTTGTGGACAAAATCACTGGTTCTTGCTGACAACCCTGATGCCTTCTTGTTTGAAACGACTAAACCTCCGGCACAAAGAAGCATTGGACAACCACTTCGTGTATACATGGACCTTGAACCTAAAAGAAAGCGATCAGGTCGTGAAGAAATATTTATTAGTTATCATGCTAAAGATGATTTGCAATCAACCTATGCCAGTTCCCTATTCCATAATGGTCGAAATTACCATATTTCTTCCCATAAGAACAATGTCCCACTTGTTTATTGGTCTTCTTTCCCTTGTACAACTCAAAGGAACAAACTTGCCCACAAAATCCTTAGTTTATTGCCTCACCATTCACTTGGCAAATGCCTAAATAATGTTGGAGGAAAAAATAAGGCACCACGTTTATATCCTGAATGTGTAGATAATGCTGCAAAACTTACCAAATGGTGGAATCATTTACACTGTGTGATGTCTCACTACAAGTTTGTCCTTGTAATTGAGGGCACTTGGACTGAGAGTTATATTACAGAAAAGATATTTTATGCCTTAGACTCTGGTGCAATTCCAATCTATTTTGGTGCTCCAAATATCATGGATTTTGTCCCTCCTCATTCAATAATAGAAGGGGTGAAATTCAAGTCAATGGAAGAATTGGCTTCGTATGTGAAGGCCATAGCAGATGATCCAATAGCCTATGGAGAATTCCATGCATGGAGAAGATGTGGTGTGTTGGGTAACTATGCAAAAACTAGAGCACTGAGCCTTGACACCTTACCTTGTCGGTTATGTCATGCTATTAGCAAAAAAGGGGGAAGAAATGCAGATGCCTAG 1302 0.3955 MLLVLSTIHFTFFTLHSEERMRVPNCSSFFTLPLRHFITLANTLGFILLILFISGIIEFPSFSLLSQFSTQPIKDQSKAFTDVVGAFKKWDSEVGCARFKKEINQQRNGSNYGFSTSLQDQFGGQLECGVLKMKHVSILVKGWTWIPDNLNNMYICPCGLSCLWTKSLVLADNPDAFLFETTKPPAQRSIGQPLRVYMDLEPKRKRSGREEIFISYHAKDDLQSTYASSLFHNGRNYHISSHKNNVPLVYWSSFPCTTQRNKLAHKILSLLPHHSLGKCLNNVGGKNKAPRLYPECVDNAAKLTKWWNHLHCVMSHYKFVLVIEGTWTESYITEKIFYALDSGAIPIYFGAPNIMDFVPPHSIIEGVKFKSMEELASYVKAIADDPIAYGEFHAWRRCGVLGNYAKTRALSLDTLPCRLCHAISKKGGRNADA* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1242 433 Gene3D - 197 401 IPR038577 -
Gso16g1242 433 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 243 426 IPR001503 GO:0006486|GO:0008417|GO:0016020
Gso16g1242 433 PANTHER ALPHA-(1,4)-FUCOSYLTRANSFERASE 42 433 - -
Gso16g1242 433 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 42 433 IPR001503 GO:0006486|GO:0008417|GO:0016020
Gso16g1242 433 PIRSF FucT_plant 32 433 IPR017177 -
Gso16g1242 433 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 130 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1242 Gso-Chr16 31723547 31727811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1242 32 431 Xyloglucan Fucosyltransferase1 AT1G71990 63.300 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1242 K14412 - gmx:100792965 891.338