Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2260 ATGACGGAGTCAGAAGAAGCTGGGGCAAAGCCAATGAACACATTGGGTGGCCAAGTCTGCCAGATCTGTGGTGATAATATTGGGAACAATGTGAATGGCGATCCTTTCATTGCTTGCAATGTTTGTGCTTTCCCTGTCTGCAGGGCGTGCTATGAATATGAAAGGAAGGATGGAAATCAGTCTTGCCCTCAGTGCAAGACCCGGTACAAGAGGCACAAAGGAAGTCCTGCAATTCTTGGAGACCAGGAAGAGGATGGGGGTGCTGATGAGGGTGCTAGTGACTTAAATTACAATTCAGAAAATCAGAATGAAAAACAGAAGATTGAGCGCATGTTGGGCTGGCAAATGGCACATGGGCGAGTAGAGGAGGCTGTTGCTCCAAATTATGATAAGGAAGTTTCTCACAATCACATTCCTCTGCTCTCTGGTGGACAAGAGGTTTCTGGAGAATTATCTGCAGCCTCACCTGAGAGACTGTCAATGGCATCTCCAGGTGGCCAAGGGAAGCGTGTCCATAATCTTCAATATTCCTCTGACCTTAATCAATCACCAAATATTAGGGTTGGGGATCCTGGATTGGGTAATGTGGCATGGAAAGAAAGAGTTGATGGCTGGAAAATGAAGCAAGATAAGAATGTTGCTCCAATGAGCACAGGCCAAGCTACTTCTGAAAGAGGAGCTGGAGATATTGATGCTAGTACTGATGTGCTTGTGGACGATTCCTTGTTGAATGATGAAGCTCGGCAACCCCTCTCTAGGAAGGTTTCTATTCCATCATCTAGGATCAATCCATATCGTATGGTCATTGCTCTGCGGCTGGTTATCCTATGCATTTTTCTGCATTATCGAATAACAAATCCTGTGCCCAATGCATATGCATTGTGGTTGATATCAGTCATATGTGAGATTTGGTTTGCCATATCGTGGATATTTGATCAATTCCCCAAGTGGCTCCCTGTGAACCGTGAAACCTATCTTGACAGACTTGCACTAAGATATGATCAGGAAGGGGAACCATCACAGCTAGCAGCTGTTGACATTTTTGTCAGTACTGTTGATCCATTAAAAGAACCCCCACTTGTGACCGCGAACACTGTCCTATCTATTCTTTCTGTTGACTACCCAGTGGATAAGGTCTCATGTTATGTCTCTGATGATGGTGCTGCTATGTTGACATTTGAAGCTCTGGCTGAGACATCAGAGTTTGCTAGGAAATGGGTTCCTTTCAGCAAGAAATATAGCATTGAACCTCGGGCACCTGAGTGGTATTTTGCACAGAAGATTGACTACTTGAAAGATAAGGTTCAACCATCATTTGTCAAAGATCGTAGAGCAATGAAGAGAGAATATGAAGAATTTAAAATTCGCGTCAATGGACTTGTTGCGAAGGCACAAAAGGTTCCTGAAGAAGGATGGGTGATGCAAGATGGTACGCCATGGCCTGGAAACAACACTAGAGACCATCCAGGAATGATTCAGGTTTTCTTGGGCCAAAGTGGAGGACTTGACACCGAGGGTAATGAACTTCCACGTTTAGTCTATGTTTCTCGTGAAAAACGTCCAGGGTTCCAACATCACAAGAAGGCTGGTGCCATGAATGCACTTGTTCGAGTCTCAGCAGTCCTTACTAATGGACCTTTCTTATTGAATCTTGATTGTGATCACTACATAAACAACAGTAAAGCCTTGAGGGAAGCTATGTGCTTTATGATGGATCCCAACCTTGGGAAAAATGTTTGCTATGTCCAGTTTCCACAGAGGTTTGATGGTATTGATAGGAATGATCGATATGCCAATCGCAATACTGTTTTCTTTGATATAAACTTGAGAGGTTTGGATGGCATTCAAGGTCCTGTTTATGTGGGTACTGGATGTGTCTTTAATAGAACAGCTTTGTATGGCTACGAGCCTCCTATTAAACCCAAGCATAAAAAGCCTGGGTTGCTTTCTTCACTCTGTGGTGGTAACCGAAAGAAGAGATCAAAATCTAGCAAGAAAGGCTCAGACAAGAAAAAATCTAGCAAGAATGTTGACCCAACTGTGCCTATCTTTAGTCTTGAGGATATAGAAGAGGGGGTGGAAGGTGCTGGATTTGATGATGAGAAATCACTACTTATGTCACAAATGAGCCTTGAGAAAAGGTTTGGTCAGTCTGCTGTCTTTGTTGCCTCTACACTCATGGAGAATGGTGGTGTTCCTCAGTCTGCAACTCCAGAAACTCTTCTTAAGGAGGCTATTCATGTTATCAGTTGTGGTTATGAGGATAAAACAGAATGGGGAAGTGAGATTGGATGGATTTATGGTTCTGTCACAGAAGATATTCTTACTGGATTCAAGATGCATGCCCGTGGTTGGAGGTCTATATACTGCATGCCCAAGCTCCCAGCGTTTAAAGGTTCTGCTCCTATCAATCTTTCAGACCGTCTGAACCAAGTGCTTCGATGGGCTTTAGGTTCGGTGGAAATTCTTTTTAGTCGACACTGTCCCATCTGGTATGGTTATAGTGGAAGGCTAAAGTGGCTCGAGAGGTTCGCATATGTGAACACCACAATCTATCCAGTCACTTCCATTCCCCTTCTCATGTATTGTACCTTACCTGCTGTCTGTCTCCTGACTAACAAGTTCATTATTCCACAGATTAGTAACATTGCAAGTATATGGTTTATCTCTCTCTTTCTTTCCATCTTTGCAACCGGTATCCTTGAGATGAGGTGGAGTGGTGTTGGAATTGATGAGTGGTGGAGAAATGAACAATTTTGGGTTATTGGTGGTGTTTCGGCCCATCTTTTTGCCGTGTTCCAAGGTTTACTCAAAGTGCTTGCTGGAATTGACACTAACTTCACCGTTACCTCAAAGGCATCAGATGAGGATGGAGACTTCGCAGAACTCTACTTGTTCAAATGGACAACCCTTCTCATCCCACCCACGACACTTCTCATCATAAACCTGGTGGGGGTTGTTGCAGGCATCTCCTATGCCATCAACAGTGGTTACCAATCATGGGGTCCCCTCTTTGGTAAGCTTTTCTTTGCATTTTGGGTGATCATCCATCTCTACCCCTTCCTCAAAGGTCTCATGGGTCGCCAGAACAGAACACCAACCATTGTTGTAGTCTGGTCCATTCTTCTTGCATCCATTTTCTCTCTGCTGTGGGTCCGAATCGACCCGTTTACGACAAGAGTCACTGGTCCTGATGTTGAGCAGTGTGGAATCAACTGCTAG 3222 0.4417 MTESEEAGAKPMNTLGGQVCQICGDNIGNNVNGDPFIACNVCAFPVCRACYEYERKDGNQSCPQCKTRYKRHKGSPAILGDQEEDGGADEGASDLNYNSENQNEKQKIERMLGWQMAHGRVEEAVAPNYDKEVSHNHIPLLSGGQEVSGELSAASPERLSMASPGGQGKRVHNLQYSSDLNQSPNIRVGDPGLGNVAWKERVDGWKMKQDKNVAPMSTGQATSERGAGDIDASTDVLVDDSLLNDEARQPLSRKVSIPSSRINPYRMVIALRLVILCIFLHYRITNPVPNAYALWLISVICEIWFAISWIFDQFPKWLPVNRETYLDRLALRYDQEGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILSVDYPVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFSKKYSIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRVNGLVAKAQKVPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKNVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPIKPKHKKPGLLSSLCGGNRKKRSKSSKKGSDKKKSSKNVDPTVPIFSLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKLPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYSGRLKWLERFAYVNTTIYPVTSIPLLMYCTLPAVCLLTNKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYLFKWTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPDVEQCGINC* 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2260 1073 MobiDBLite consensus disorder prediction 644 679 - -
Gso15g2260 1073 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 466 636 IPR029044 -
Gso15g2260 1073 Pfam Zinc-binding RING-finger 10 85 IPR027934 -
Gso15g2260 1073 SUPERFAMILY RING/U-box 5 87 - -
Gso15g2260 1073 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 94 IPR013083 -
Gso15g2260 1073 ProSiteProfiles Zinc finger RING-type profile. 20 66 IPR001841 -
Gso15g2260 1073 MobiDBLite consensus disorder prediction 73 104 - -
Gso15g2260 1073 CDD mRING-HC-C4C4_CesA_plant 18 68 - -
Gso15g2260 1073 SUPERFAMILY Nucleotide-diphospho-sugar transferases 359 886 IPR029044 -
Gso15g2260 1073 Pfam Cellulose synthase 345 1066 IPR005150 GO:0016020|GO:0016760|GO:0030244
Gso15g2260 1073 PANTHER CELLULOSE SYNTHASE 5 1073 - -
Gso15g2260 1073 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 5 1073 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2260 Gso-Chr15 51503726 51511678 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g2329 11 39235690 39243528 Gso15g2260 15 51503726 51511678 PCT