Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2180 ATGTGCGGCTCTAAGACCAAAGTGACGATTGGCTTAGAAGTCATCGCTGCTGCTACTACTACAACAACTGCTAAGCCTTCAGTGGCTAGAATCAATGGAAGGCCAGTCCTCCAACCAACTTGTAACCGTGTTCCAAACCTTGAGAGGAGGAATTCAATCAAGAAAGTGGCACCAGCAAAGTCACTTTCTCCACCATCACCACCACTTCCTAGCAAGACCTCATTGACACCCCCAGTTTCTCCAAAGTCAAAGTCCCCTAGGCTTCCTGCCACAAAGAGAGGCAATGACAACAATGGACTTAACTCAAGTTATGAAAAGATTGTGATCCCCAGAAGCTCCATAAAAACTCCAACTTTGGAGAGAAAGAAGTCCAAGAGCTTCAAGGAAGGTTCCTGTGTGTCTGCTTCTATTGAGGCTTCATTGAGTTACTCATCTTCTTTGATCACTGACTCCCCAGGGAGCATAGCTGCTGTGAGGAGGGAGCAGATGGCACTGCAACAAGCACAAAGGAAAATGAAGATTGCCCATTATGGACGATCAAAATCTGCAAAGTTTGAAAGAGTTGTTCCTCTTGATCCTTCAAATACCAGTCTTGCATCAAAGCCAACTGAAGAGGAGAAGAGATGCAGCTTTATCACAGCCAATTCAGATCCCATCTATATTGCTTATCATGATGAGGAATGGGGAGTTCCAGTTCATGATGACAAGATGCTGTTTGAACTTTTAGTTTTGAGCGGTGCTCAAGTTGGATCTGATTGGACCTCAACCTTGAAGAAACGCCTAGATTTCAGGGCTGCATTTTCAGAATTTGATGCAGAAACCGTGGCCAACTTGACTGATAAGCAAATGATGTCTATTAGTTCTGAATATGGCATTGACATAAGCAGAGTCCGAGGAGTTGTTGATAATGCTAACCAAATTTTAGAGATTAAGAAAGACTTTGGCTCATTTGACAAGTACATTTGGGGGTTTGTGAATCATAAACCACTCTCCACTCAATACAAGTTTGGCCACAAGATTCCAGTGAAGACATCAAAATCAGAGAGCATAAGCAAAGACATGGTGAGGAGGGGCTTTAGGTACGTTGGTCCAACAGTGGTTCATTCATTCATGCAAGCATCTGGCCTCACCAATGACCACTTAATCACATGCCACAGGCACTTGCAGTGCACCCTATTGGCAGCTCGATCCTTTGTACCATAG 1203 0.4406 MCGSKTKVTIGLEVIAAATTTTTAKPSVARINGRPVLQPTCNRVPNLERRNSIKKVAPAKSLSPPSPPLPSKTSLTPPVSPKSKSPRLPATKRGNDNNGLNSSYEKIVIPRSSIKTPTLERKKSKSFKEGSCVSASIEASLSYSSSLITDSPGSIAAVRREQMALQQAQRKMKIAHYGRSKSAKFERVVPLDPSNTSLASKPTEEEKRCSFITANSDPIYIAYHDEEWGVPVHDDKMLFELLVLSGAQVGSDWTSTLKKRLDFRAAFSEFDAETVANLTDKQMMSISSEYGIDISRVRGVVDNANQILEIKKDFGSFDKYIWGFVNHKPLSTQYKFGHKIPVKTSKSESISKDMVRRGFRYVGPTVVHSFMQASGLTNDHLITCHRHLQCTLLAARSFVP* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2180 400 PANTHER OS04G0501200 PROTEIN 1 396 - -
Gso15g2180 400 MobiDBLite consensus disorder prediction 90 105 - -
Gso15g2180 400 MobiDBLite consensus disorder prediction 40 105 - -
Gso15g2180 400 MobiDBLite consensus disorder prediction 61 75 - -
Gso15g2180 400 Pfam Methyladenine glycosylase 214 387 IPR005019 GO:0006284|GO:0008725
Gso15g2180 400 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE I 1 396 - -
Gso15g2180 400 Gene3D Hypothetical protein; domain 2 206 390 - -
Gso15g2180 400 SUPERFAMILY DNA-glycosylase 207 390 IPR011257 GO:0003824|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2180 Gso-Chr15 50079240 50082389 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1346 8 12794599 12797704 Gso15g2180 15 50079240 50082389 GST
Gso15g2180 15 50079240 50082389 Gso15g1823 15 36716822 36720414 PCT
Gso15g2180 15 50079240 50082389 Gso8g1938 8 19356754 19360255 PCT
Gso15g1823 15 36716822 36720414 Gso15g2180 15 50079240 50082389 PCT
Gso8g1938 8 19356754 19360255 Gso15g2180 15 50079240 50082389 PCT