Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1975 ATGTCTATACAACATGAAAATTCTGAGACAAAAAACGTAATATGTCCACAAAAAAGACTAGAAAATCTTATGCATCATGCTGGAAACAAGTTCTGCGCTGATTGTGGAACAACAGAGCCAAGATGGGTGTCTTCAAGTTTTGGAGTATTTATATGCATCAAGTGTTCTGGCATACATAGAAGTCTAGGAGTCCACATATCAAAGGTTCTATCACTGAAGCTAGATGAATGGACGGACGAACAAGTTGATGCATTAGCAAAGTTGGGTGGAAATACATTATTAAATAAGAAGTACGAAGCTTGCCTCCCAAGTAACATAAGAAAACCAAAACCACATTCATCCATTGAGGAGCGCTCTGAATTTATTCGGAGAAAATATGAGATGCAACAATTTATCGGGTATGATGACGGTTTATCATGCCCCATTGTCCCATCTCAAGGAAGAAGCATATCACTTGCTCTTGCTCAAAGTAGCACTTCATACTACAATTCTTTTATGGACAACAAACCATCTGAAAAACACCAAAGCAAACATCGTATTGGAAACACATTCCGAAACAGCTGGGGAAGAAAAGATTCTGAGCACAAGTCTGCAAAGAAAAGTACCTCTTTGGCAGGTATGGTTGAATTTGTTGGGTTGATTAAGGTTAATGTGGTTAAAGGCACTCACCTAGCCATTCGAGATGTAATGACTAGTGACCCTTATGTCATCCTTTCTTTGGGTCACCAATCAGTAAAAACACGTGTCATAAAGAGCAATTTGAATCCGGTCTGGAATGAAAGCCTAATGCTATCAATTCCAGAGAACATTCCTCCTCTAAAAGTGCTTGTGTATGACAAAGATACATTTTCAACTGATGATTTTATGGGGGAGGCTGGAATAGACATTCAACCTCTAGTTATTGCCGCAAAGGCCTACGAGAAATTGAATATCAATGAGTCCATGCAGCTTGGAAAATTTGTAGCAAGCAAGGACAACACCCTTGTTAGGGATGGTATCATATCTCTTGATGAAGGGAAGATCAAACAGGAAATCTCATTGAGGCTACAGAATATTGAGAGGGGTGAGCTGGAGCTTGAGCTTGAGTGTGTTCCCCTTACTCAATAG 1107 0.3966 MSIQHENSETKNVICPQKRLENLMHHAGNKFCADCGTTEPRWVSSSFGVFICIKCSGIHRSLGVHISKVLSLKLDEWTDEQVDALAKLGGNTLLNKKYEACLPSNIRKPKPHSSIEERSEFIRRKYEMQQFIGYDDGLSCPIVPSQGRSISLALAQSSTSYYNSFMDNKPSEKHQSKHRIGNTFRNSWGRKDSEHKSAKKSTSLAGMVEFVGLIKVNVVKGTHLAIRDVMTSDPYVILSLGHQSVKTRVIKSNLNPVWNESLMLSIPENIPPLKVLVYDKDTFSTDDFMGEAGIDIQPLVIAAKAYEKLNINESMQLGKFVASKDNTLVRDGIISLDEGKIKQEISLRLQNIERGELELELECVPLTQ* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1975 368 ProSiteProfiles C2 domain profile. 190 309 IPR000008 -
Gso15g1975 368 CDD ArfGap 20 126 - -
Gso15g1975 368 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 13 368 IPR044518 GO:0005096|GO:0005543
Gso15g1975 368 Pfam Putative GTPase activating protein for Arf 18 132 IPR001164 GO:0005096
Gso15g1975 368 MobiDBLite consensus disorder prediction 168 199 - -
Gso15g1975 368 Gene3D Arf GTPase activating protein 2 137 IPR038508 -
Gso15g1975 368 PRINTS HIV Rev interacting protein signature 29 48 IPR001164 GO:0005096
Gso15g1975 368 PRINTS HIV Rev interacting protein signature 48 65 IPR001164 GO:0005096
Gso15g1975 368 PRINTS HIV Rev interacting protein signature 69 90 IPR001164 GO:0005096
Gso15g1975 368 SUPERFAMILY ArfGap/RecO-like zinc finger 17 132 IPR037278 -
Gso15g1975 368 Gene3D C2 domain 211 368 IPR035892 -
Gso15g1975 368 SMART C2_3c 213 308 IPR000008 -
Gso15g1975 368 Pfam C2 domain 213 300 IPR000008 -
Gso15g1975 368 SMART arf_gap_3 17 138 IPR001164 GO:0005096
Gso15g1975 368 CDD C2_ArfGAP 211 355 - -
Gso15g1975 368 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 13 368 - -
Gso15g1975 368 ProSiteProfiles ARF GTPase-activating proteins domain profile. 17 132 IPR001164 GO:0005096
Gso15g1975 368 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 209 306 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1975 Gso-Chr15 44452608 44464926 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1975 15 44452608 44464926 Gso11g2294 11 38850462 38856488 GST
Gso4g1143 4 20751297 20771794 Gso15g1975 15 44452608 44464926 PCT
Gso15g1975 15 44452608 44464926 Gso4g1143 4 20751297 20771794 PCT