Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1967 ATGGAGGATAATCCCCCTTCAAGTGTTTTAGATGGGACCGTTGTTGGGATCAAATTTGGTATGGCTACACGCCAGGAAATTTGTACAGCATCCATTAGTGACTCTTCAATTAGTCATGCTAGTCAGCTGTCAAATCCATTCCTTGGGCTGCCCCTTGAGTTTGGCAGATGTGAATCTTGTGGTACTTCTGAAGTTGGAAAATGCGAAGGTCACTTCGGATATATTGAGTTGCCAATTCCAATATATCACCCAAGTCATATCAGTGACTTGAAACGGATGCTGAGCATGGTCTGCTTAAACTGCCTAAAATTAAGGAAAACCAAGCTTCCAGCTTCAAGCAGTGGTTTAGCCCAGAGATTAATATCTCCTTGTTGTCAGGAGGATAAGGCTGCTCTAGTTTCTATTCGGGAAGTTAAAACAAGTGATGGGGCTTGTTATCTGGCGTTGAAAGTATCCAAATCCAAGATGCAAAATGGTTTTTGGAGTTTCTTAGAAAAATATGGTTATCGCTATGGGGGTGATCACACTCGAGCCTTGCTTCCTTGTGAGGCAATGGAAATTATTAAGAGAATTCCGATAGAGACAAAAAAAAAGCTTGCTGGAAAAGGATATTTTCCTCAAGATGGATATGTTTTGAAGTATCTTCCGGTGCCACCAAATTGCTTGTCTGTGCCAGAAGTTTCAGACGGTGTCAGTGTCATGTCGTCGGATCCTTCCATAACAATTCTCAGAAAATTGCTCAGGAAGGTTGAAATCATAAAAAGCTCTAGATCTGGTGAACCAAATTTCGAGTCTCATCACGTAGAAGCAAATGATTTGCAGTCTGTGGTTGATCAATATTTTCAAATTAGAGGAACTTCTAAGCCAGCACGTGATATAGAGACACATTTTGGGGTCAATAAAGAGCTTACTGCATCCTCAACAAAAGCATGGCTTGAGAAAATGAGGACATTATTTATAAGAAAGGGTTCAGGTTTTTCTTCCCGGAATGTAATTACTGGAGATTGTTATAAGAGGATAAATGAAGTAGGAATTCCGGTTGAAGTTGCCCAACGGATAACGTTTGAGGAGAGAGTTAACATCCACAACATCAGATATTTACAGAAGTTGGTTGATGAACATTTGTGCCTGACCTACAAGGAAGGTGGGTCAACTTATTCACTCAGGGAGGGCTCAAAGGGGCACATATATCTCAAGCCTGGTCAGATAGTGCATCGGAGGATTATGGATGGGGATATTGTCTTCATCAACAGACCACCTACAACACACAAGCACTCCTTACAAGCCCTTTATGTTTACATCCATGAAGACCACACTGTGAAGATAAATCCTTTAATTTGTGGACCACTTGGGGCTGATTTTGATGGTGACTGTGTCCATCTGTTTTATCCGCAATCACTTGCTGCTAAAGCTGAAGTTGTGGAGCTATTTTCTGTGGAGAATCAACTGCTCAGCTCTCACAGTGGTAATTTGAACCTACAGTTATCCACAGACTCGTTGTTGTCACTGAAGATGTTGGTCAAGAGATGTTTTTTTGATAGAGCAGCAGCTAATCAATTGGCGATGTTTATTTTGCTTCCTTTGCCTCGGCCTGCTTTGCTCAAGGCCAGTTCTGGTGATGCTTGTTGGACTTCCATCCAAATTTTACAGTGTGCTTTACCTTTGGGTTTTGATTGCACTGGGGGACGGTATTTGATTAGGCAGAGTGAGATCTTAGAATTTGAATTCAGCAGGGATGTTCTGCCTGCAACCGTAAATGAAATAGCAGCTTCAATTTTCTTTGGCAAGGGTCCCAAGGAGGCACTTAATTTCTTTGATGTATTGCAACCCTTTTTGATGGAAAGCTTATTTGCGGAAGGGTTTAGTGTTAGCCTGGAAGAGTTTTCAATATCCAGGGCAATTAAAAGGATAATAAGAAAAAGCATTGGAAAAGTTTCTTCTCTGCTGTATCAGCTGAGGTCCTTGTACAATGAGCTGGTGGCGCAGCAACTGGAGAAGCACATTCGAGATGTTGAACTTCCTATCATTAATTTTGCTCTAAAGTCAACTAAATTAGGAGATTTAATTGATTCGAAGAGTAAATCTGCTATTGATAAGGTTGTTCAGCAGATTGGGTTTTTAGGGCAGCAACTTTTTGATAGGGGAAGATTCTACTCAAAGGGATTGGTAGATGATGTGGCATCACATTTTCATGCAAAGTGTTGTTATGACGGGGATGGTTATCCCTCTGCTGAGTATGGACTGCTCAAAGGGTGTTTTTTTAATGGTTTGGATCCATACGAAGAGATGGTGCATTCGATTTCAACAAGGGAAATAATGGTGCGTTCTTCGAGAGGATTATCTGAACCAGGAACACTCTTTAAGAATTTGATGGCCATCCTTCGGGATGTTGTTATCTGTTATGATGGAACTGTCAGAAACATTTGTAGTAATTCCATCATCCAGTTTGAATACGGGATACAAGCTGGAGACAAAAGTGAGCACTTATTCCCTGCTGGTGAGCCTGTAGGTGTGTTGGCTGCAACTGCTATGTCAAATCCTGCTTACAAGGCTGTCCTTGATGCTAGTCCTAGTAGCAACTCTTCATGGGAGTTGATGAAGGAAATATTACTCTGCAAGGTTAATTTTAGGAATGAACTTGTTGATAGGCGTGTCATTTTGTACTTGAATGACTGTGATTGTGGAGGGAGTTATTGCCGAGAAAATGCAGCATATTCAGTTAAAGATCAATTGAGAAAAGTCAGTCTCAAGGATGCAGCTGTGGAGTTCATTATTGAATACCAACAACAGCGAACTCAAAAGGAAAATTCTGAAACTGATGTTGGACTTGTTGGTCATATTTATTTGGATGAGATGATGTTAGAGGAGCTGAAGATCAGCATGGCCTATGTTTTCGACAAATGCCATGAAAGACTCAAGTCTTTTAGTCAGAAAAAGAAAGTTAATCAATCTTTGAAGAACATTGAATTATCATTTAGTGAGTCTTGCTCATCTTCACATCCTGCTGCACCATGTTTAACATTTTGGCTAAAGAATTATGATAGTGATTTGGATAATGCTGTAAAGGTCCTGGCTGAAAAGATCTGCCCTGTTCTGTTTAAAACAATAATCCAAGGAGACCCGCGCATTAGCTCTGCGAGTATAATCTGGGTTAGTCCAGATACAAACACATGGGTCCGAAACCCTTATAAATCTTCTAATGGTGAATTGGCACTTGACATCATTCTCGAGAAGGAAGCTGTCAAGCAGAGTGGCGATGCTTGGAGAGTTGTACTTGATGCCTGCCTTCCTGTTCTTCACTTGATTGATACCAGGCGTTCCATCCCTTACGCTATTAAGCAGATTCAGGAATTACTGGGGATATCATGTACTTTTGATCAAGCGATTCAGCGTGTTGCAGCATCTGTGAAAATGGTGGCGAAAGGTGTACTTAGGGAGCATCTAATTCTGTTAGCTAGTAGTATGACTTGTGGTGGGAACTTGGTTGGCTTTAATATAGGTGGATATAAAGCTCTGTCTCGTCAATTAAATATACAAGTACCATTCACAGATGCAACACTCTTTACACCTAAAAAGTGTTTTGAGAGAGCTGCTGAGAAATGCCATACTGATTCTCTGTCAAGCATAGTTGCCTCCTGTTCCTGGGGTAAACATGTGGCAGTTGGTACAGGATCAAAATTTGATGTTGTTTGGGATGCAAATGAGATAAAATCAAATGAAATTGAAGGGATGGATGTTTACAGTTTTCTTCACATGGTGAAAAGCTTTACCAATGGCGAAGAAGAAACCGATGCTTGTTTGGGTGAAGATATTGATGATTTGCTGGAAGAAGAATATATGGACTTGGGCATGTCCCCACAACATAACTCTGGTTTTGAAGCTGTCTTTGAAGAGAATCCTGAAGTACTGAATGGTTCAACATCCAATGGTTGGGATGTAAGTTCAAATCAGGGTGAATCAAAAACCAATGAGTGGTCAGGTTGGGCAAGTAGTAACAAAGCTGAAATAAAAGATGGTAGATCTGAAATTGCCCCCAAGAATTCTTGGGGGAAAACTGTCAACCAAGAAGACTCTTCCAAGTCTAACCCTTGGAGTACAAGCACCATAGCAGATCAGACAAAAACTAAATCTAATGAATGGTCTGCCTGGGGAAGTAACAAGTCTGAAATACCAGTTGGTTGGGCAAGTAGTAACAAAACTGAAATAAAAGATGGTAGATCTGAAACTGCCCAAGAGAATTCTTGGGGGAAAACTGTCAACCAAGAAGACTCTTCCAAGTCTAATGCTTGGAATACAAGCACCACAGTAGATCATGCAAACACTAAATCTAATGAATGGTCTGCCTGGGGAAGTAACCAGTCTGAAATACCAGCTGGTGGATCTAAAGCAGTTCAAGAAGATTCTTGGGGCTCAAGTAAGTGGAAGGCTGATGTTGCCCAAGAAGACAATTCCAGGCTTGGTGCTTGGGATGCAAATGCAGCAGATCAGACAAAATCTAGTGAATGGTCGGGTTGGGGAAAGAAGAAAGATGTTACCCAAGAAGACAATTCCAGGCTTGGTGCTTGGGATGCAAATGCAGCAGATCAGACAAAATCTAGTGACTGGTCGGGTTGGGGAAAGAAGAAAGATATTACCCAAGAAGACAATTCCAGGCTTGGTGCTTGGGATGCAAATGCAGCAGATCAGACAAAATCTAGTGAATGGTCGGGTTGGGGAAAGAAGAAAGATGTTACCCAAGAAGACAATTCCAGGCTTGGTGCTTGGGATGCAAATACAGCAGATCAGACAAAATCTAATGAATGGTCAGGTTGGGGAAAGAAGAAAGAAGTTACCCAAGAAGACAATTCCAGGCTTGGTGCTTGGGATGCAAATGCAGCAGATCAGACAAAATCTAATGAATGGTCAGGTTGGGGAAAGAAGAAAGATGTTACCCAAGAAGACAATTCCAGGTTTGGTGCTTGGGATGCAAATGCAGAAGATCAGACAAAATCTAATGAATGGTCAGGTTGGGGAAAGAAGAAAGATGTTACCCAAGAAGACAATTCCAGGCTTGGTGCTTGGGATGCAAATGCAGCAGATCAGACAAAATCTAATGAATGGTCAGACTGGGGAAAGAAGAAAGAAGTTACCCAAGAAGACAATGTCCAAGATTCTTGGGGCTCCGGTAAGAGGAAAGACAAAGTTACCCAAGAAGACAATTCTGGGTCTGGTGGTTGGGGTGCCAACAGAACAGATCTGGCAAAATCCAAATCTAGTGAATGGTCCAGCTGGGGAAAGAACAAGTCTGAAATACCAGCTGGTGGATCTGAAAATGTGCAGAATGACTCATGGGGCTCGGGTAAATTGGAAGATGATACCCAAAAAGAAAATTCTGGGTCTGCATGGGTGAGAAATAAAGCTGAAACAATAGATGGTGGGTCAGAAAAGCCCCAAGAGGATGCTTGGAATTCTGGTAATTGGAAAGCTGAATCAAAAGTCGGCAATGCCTCTTGGGGAAAACCCAAATCCTCAGAAAGTCAAGCATGGGATTCCCATAATCAGTCAAATCAAAATTCAAGTTCACAGGGATGGGAATCACATATTGCTTCAGCTAATTCAGAAAGTGAAAAAGGTTTTCAGTGGGGAAAGCAAGGTAGAGACTCGTTTAAGAAAAATCGATTTGAAGGTTCGCAAGGCCGGGGTTCAAATGCTGGTGACTGGAAAAATAGGAATCGCCCACCTAGAGCACCTGGACAGAGATTGGACATTTATTCATCTGGTGAGCAGGATGTTCTGAAGGATATTGAACCCATTATGCAGTCTATCAGACGAATCATGCAACAACAGGGGTACAATGATGGGGACCCACTGGCTGCTGAAGATCAACTTTTTGTACTGGAGAATGTCTTTGAGCACCACCCAGATAAAGAAACCAAAATGGGCACTGGAATTGATTATGTCATGGTTAACAAACACAGTAGTTTCCAGGAAAGTAGATGCTTTTATGTGGTTTGTAAAGATGGTGAAAGCAAGGACTTTTCCTACCGGAAGTGTTTGGCCAACTATATAAGCAAGAAGTATCCTGACCTTGCTGAATCATTCCTTGGAAAATATTTTCGGAAACCTCGTGCACGGGGGGACCAGACTGCAACACCAGGGCGGGATGAAGCAGCCACTCCGGGTGAGCAGACAGCAACGCCAGGCCGGGATGAAGCAGCAACTCCGGCTGAGCAGATCTCAACACCCACCCCTATGGAAACCAATGAGTAG 6249 0.4207 MEDNPPSSVLDGTVVGIKFGMATRQEICTASISDSSISHASQLSNPFLGLPLEFGRCESCGTSEVGKCEGHFGYIELPIPIYHPSHISDLKRMLSMVCLNCLKLRKTKLPASSSGLAQRLISPCCQEDKAALVSIREVKTSDGACYLALKVSKSKMQNGFWSFLEKYGYRYGGDHTRALLPCEAMEIIKRIPIETKKKLAGKGYFPQDGYVLKYLPVPPNCLSVPEVSDGVSVMSSDPSITILRKLLRKVEIIKSSRSGEPNFESHHVEANDLQSVVDQYFQIRGTSKPARDIETHFGVNKELTASSTKAWLEKMRTLFIRKGSGFSSRNVITGDCYKRINEVGIPVEVAQRITFEERVNIHNIRYLQKLVDEHLCLTYKEGGSTYSLREGSKGHIYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALYVYIHEDHTVKINPLICGPLGADFDGDCVHLFYPQSLAAKAEVVELFSVENQLLSSHSGNLNLQLSTDSLLSLKMLVKRCFFDRAAANQLAMFILLPLPRPALLKASSGDACWTSIQILQCALPLGFDCTGGRYLIRQSEILEFEFSRDVLPATVNEIAASIFFGKGPKEALNFFDVLQPFLMESLFAEGFSVSLEEFSISRAIKRIIRKSIGKVSSLLYQLRSLYNELVAQQLEKHIRDVELPIINFALKSTKLGDLIDSKSKSAIDKVVQQIGFLGQQLFDRGRFYSKGLVDDVASHFHAKCCYDGDGYPSAEYGLLKGCFFNGLDPYEEMVHSISTREIMVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSIIQFEYGIQAGDKSEHLFPAGEPVGVLAATAMSNPAYKAVLDASPSSNSSWELMKEILLCKVNFRNELVDRRVILYLNDCDCGGSYCRENAAYSVKDQLRKVSLKDAAVEFIIEYQQQRTQKENSETDVGLVGHIYLDEMMLEELKISMAYVFDKCHERLKSFSQKKKVNQSLKNIELSFSESCSSSHPAAPCLTFWLKNYDSDLDNAVKVLAEKICPVLFKTIIQGDPRISSASIIWVSPDTNTWVRNPYKSSNGELALDIILEKEAVKQSGDAWRVVLDACLPVLHLIDTRRSIPYAIKQIQELLGISCTFDQAIQRVAASVKMVAKGVLREHLILLASSMTCGGNLVGFNIGGYKALSRQLNIQVPFTDATLFTPKKCFERAAEKCHTDSLSSIVASCSWGKHVAVGTGSKFDVVWDANEIKSNEIEGMDVYSFLHMVKSFTNGEEETDACLGEDIDDLLEEEYMDLGMSPQHNSGFEAVFEENPEVLNGSTSNGWDVSSNQGESKTNEWSGWASSNKAEIKDGRSEIAPKNSWGKTVNQEDSSKSNPWSTSTIADQTKTKSNEWSAWGSNKSEIPVGWASSNKTEIKDGRSETAQENSWGKTVNQEDSSKSNAWNTSTTVDHANTKSNEWSAWGSNQSEIPAGGSKAVQEDSWGSSKWKADVAQEDNSRLGAWDANAADQTKSSEWSGWGKKKDVTQEDNSRLGAWDANAADQTKSSDWSGWGKKKDITQEDNSRLGAWDANAADQTKSSEWSGWGKKKDVTQEDNSRLGAWDANTADQTKSNEWSGWGKKKEVTQEDNSRLGAWDANAADQTKSNEWSGWGKKKDVTQEDNSRFGAWDANAEDQTKSNEWSGWGKKKDVTQEDNSRLGAWDANAADQTKSNEWSDWGKKKEVTQEDNVQDSWGSGKRKDKVTQEDNSGSGGWGANRTDLAKSKSSEWSSWGKNKSEIPAGGSENVQNDSWGSGKLEDDTQKENSGSAWVRNKAETIDGGSEKPQEDAWNSGNWKAESKVGNASWGKPKSSESQAWDSHNQSNQNSSSQGWESHIASANSESEKGFQWGKQGRDSFKKNRFEGSQGRGSNAGDWKNRNRPPRAPGQRLDIYSSGEQDVLKDIEPIMQSIRRIMQQQGYNDGDPLAAEDQLFVLENVFEHHPDKETKMGTGIDYVMVNKHSSFQESRCFYVVCKDGESKDFSYRKCLANYISKKYPDLAESFLGKYFRKPRARGDQTATPGRDEAATPGEQTATPGRDEAATPAEQISTPTPMETNE* 2083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1967 2082 MobiDBLite consensus disorder prediction 1699 1731 - -
Gso15g1967 2082 MobiDBLite consensus disorder prediction 1347 1395 - -
Gso15g1967 2082 Gene3D RNA polymerase Rpb1, domain 3 487 622 IPR042102 -
Gso15g1967 2082 MobiDBLite consensus disorder prediction 1411 1459 - -
Gso15g1967 2082 PANTHER DNA-DIRECTED RNA POLYMERASE 197 1383 IPR045867 GO:0003899|GO:0006351
Gso15g1967 2082 MobiDBLite consensus disorder prediction 1568 1582 - -
Gso15g1967 2082 MobiDBLite consensus disorder prediction 1308 1915 - -
Gso15g1967 2082 PANTHER DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 197 1383 - -
Gso15g1967 2082 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 13 1234 - -
Gso15g1967 2082 MobiDBLite consensus disorder prediction 1535 1549 - -
Gso15g1967 2082 MobiDBLite consensus disorder prediction 1812 1872 - -
Gso15g1967 2082 MobiDBLite consensus disorder prediction 1666 1681 - -
Gso15g1967 2082 MobiDBLite consensus disorder prediction 1634 1648 - -
Gso15g1967 2082 SMART rpolaneu7 208 507 IPR006592 GO:0003677|GO:0003899|GO:0006351
Gso15g1967 2082 Pfam RNA polymerase Rpb1, domain 3 482 626 IPR007066 GO:0003677|GO:0003899|GO:0006351
Gso15g1967 2082 MobiDBLite consensus disorder prediction 1601 1615 - -
Gso15g1967 2082 MobiDBLite consensus disorder prediction 1766 1780 - -
Gso15g1967 2082 Gene3D - 322 486 - -
Gso15g1967 2082 MobiDBLite consensus disorder prediction 2036 2082 - -
Gso15g1967 2082 MobiDBLite consensus disorder prediction 1584 1600 - -
Gso15g1967 2082 Pfam RNA polymerase Rpb1, domain 2 325 478 IPR000722 GO:0003677|GO:0003899|GO:0006351
Gso15g1967 2082 Pfam RNA polymerase Rpb1, domain 5 756 1171 IPR007081 GO:0003677|GO:0003899|GO:0006351
Gso15g1967 2082 Pfam Protein of unknown function (DUF3223) 1943 2012 - -
Gso15g1967 2082 Gene3D - 796 827 - -
Gso15g1967 2082 MobiDBLite consensus disorder prediction 1732 1759 - -
Gso15g1967 2082 Gene3D RNA polymerase ii 354 406 - -
Gso15g1967 2082 MobiDBLite consensus disorder prediction 1873 1887 - -
Gso15g1967 2082 Gene3D RNA polymerase II, clamp domain 9 120 IPR044893 -
Gso15g1967 2082 Pfam RNA polymerase Rpb1, domain 1 42 282 IPR007080 GO:0003677|GO:0003899|GO:0006351
Gso15g1967 2082 Gene3D - 1922 2017 - -
Gso15g1967 2082 MobiDBLite consensus disorder prediction 1502 1516 - -
Gso15g1967 2082 MobiDBLite consensus disorder prediction 1308 1330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1967 Gso-Chr15 44148163 44164724 Dispersed/Transposed