Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1964 ATGAACATGTTAGGCCTTAGAGACCTATTTCTCATAGCTCCAACTCCTTCTCAACTTCACCACCATCAACAACACCAACACCAAAACCAACCCATTTCAGCAGAACACCATTCCAACCTCCCTTTGCCTTCACAAGCCTCTCTCAGCGTTGGCCTTGGCATTTTCCCTCTCCTAACAGTGCCACACACTAATGATGTTCATGCTCAGGTTCAAGACTGTGCCAACAACAACACTAACAACACCAACACCAACTATTGGAACCTGAAGATGTGTGGTCCCACTGAAGTGAATTCCACAAGAAAAGGTGTCATGAACATGGAGGATGAGGGGAGCAATAAGCAAATGATGGAGAGTGAGGAAAGTGGTGGTGAGTTCAGGGTGTGCCAAGATTGTGGCAATAGGGCCAAGAGGGATTGCAGCTTCAGAAGGTGCAGGACTTGTTGCAAGGGACGTGGCTTTGATTGCAGCACTCACGTTAAGAGCACGTGGGTCCCCGTGTCTCATAGACGCGGTGGCAGTAATAGTGGTGATGATCACAATGACGATGACGATGGTAATGCTTCCAAGAGGCTAAGAACTTTGGGGTCATCAAAGAATGTTGCTGCTACCTCTCACAGTTCCACTTCCAATGCTACCCCAACAAAGAGCTTTGATAGTCAACAAGATGCTGGTTTCAAGCAGTCTTTGCCACGGCATGTGCGTGCACCCGCTGTGTTTAGGTGCCATAGAGTGTCTGCTATTGGGAGTGGTGAAGATGAGATTGCTTACATGGCCACGGTTCATATTAGTGGCCATGTGTTTAAGGGGTTTCTGTATGATCATGGTGCTGATACCAGAAATGATGTGCCTAGTGTCTCAGAACTGCAATTGGGAAACAATGGAAGTGGAAAGAATACCAATAGGGAATGTTCTTCTGCAATTGGGGTTCCAACTAGTGCTTACCCTGCTTCTGTTTGTTGA 960 0.4708 MNMLGLRDLFLIAPTPSQLHHHQQHQHQNQPISAEHHSNLPLPSQASLSVGLGIFPLLTVPHTNDVHAQVQDCANNNTNNTNTNYWNLKMCGPTEVNSTRKGVMNMEDEGSNKQMMESEESGGEFRVCQDCGNRAKRDCSFRRCRTCCKGRGFDCSTHVKSTWVPVSHRRGGSNSGDDHNDDDDGNASKRLRTLGSSKNVAATSHSSTSNATPTKSFDSQQDAGFKQSLPRHVRAPAVFRCHRVSAIGSGEDEIAYMATVHISGHVFKGFLYDHGADTRNDVPSVSELQLGNNGSGKNTNRECSSAIGVPTSAYPASVC* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1964 319 MobiDBLite consensus disorder prediction 172 189 - -
Gso15g1964 319 MobiDBLite consensus disorder prediction 166 225 - -
Gso15g1964 319 MobiDBLite consensus disorder prediction 190 225 - -
Gso15g1964 319 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 127 169 IPR006510 -
Gso15g1964 319 MobiDBLite consensus disorder prediction 17 43 - -
Gso15g1964 319 PANTHER LRP1 CARBOXY-TERMINAL DOMAIN PROTEIN 2 319 - -
Gso15g1964 319 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 2 319 IPR007818 GO:0003700|GO:0006355
Gso15g1964 319 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 229 275 IPR006511 -
Gso15g1964 319 Pfam Domain of unknown function (DUF702) 127 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1964 Gso-Chr15 44064546 44071232 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Gso15g1964 DUF702 4.1e-53 No_clan