Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1956 ATGGGAGTTGTTGAACAAGAAATGGAAGAGGAAGAGAAAGAAAAACATACAAACAACCAAGACCAAAACAACCATAACCACCCTTCTTCTCTCCACCCAATTAAGGAAGAGTGTGTTAGTGTGAGAAAACCCTTTAGTGGTGATAGAGTGAAGAGAGATGAATGGAGTGAAGGGGCAGTGTCAACCCTCCTTGAGGCTTATGAGGCCAAATGGGTGCTAAGAAACAGAGCCAAACTCAAGGGCCATGATTGGGAGGATGTGGCACGGCACGTGTCGGCACGTGCCAACTGCACCAAATCACCAAAGACTTCAACGCAGTGTAAGAACAAGGTTGAGTCCATGAAGAAGAGATACAGATCAGAATCAGCAGCAACAGCAGATCATGCATCATCATCATGGCCTCTTTATTCACGGCTTGATCTTCTTCTTAGGGGAACTGGACCCGTGTTGTCGTCGCCGCCGCCGCCGCCTCCGGCAATGATGGCGGCGGCGATGCCGGTTCTGTCTCCGGTGGAGCCGTCGCAACCGCCGCAGCTGTCGCCGCCTCTGGCGGCTCCTTCAGGGCCACTTGCAAATGCACAAAACTCGCATGGATCCAACGGAATTGATGAGAAGCTTGCTAAGGAAGATGGGTTAGGAACTAAGTCATCTGATCAAGTATCTAGCAAGAATCCATTGGACACAGATAGCAGCACGCCAGCACTTTATAGCAAGAAGGACGGGTTAAGATGCAACAAGAGGAAGAAGAAAACAATTGACAACACAGGGCGAAGAAGGAAAGAGTGTGTGGAGATAGCAGAAAGCTTAAGATGGCTTACAGAAGCTATGATAAGGTCAGAACAAGCAAGAATGGACACAATGAAGGAGATAGAGAGGATGAGAGTTGAAGCTGAGGCCAAGAGAGGGGAAATGGACCTTAAGAGAACTGAAATAATTGCCAATACACAGTTAGAGATTGCTAGGATCTTTGCAAGTGTCAACAATAAAGGTGTTGATTCATCTCTAAGAATTGGAAGAAGTTAA 1023 0.4731 MGVVEQEMEEEEKEKHTNNQDQNNHNHPSSLHPIKEECVSVRKPFSGDRVKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVARHVSARANCTKSPKTSTQCKNKVESMKKRYRSESAATADHASSSWPLYSRLDLLLRGTGPVLSSPPPPPPAMMAAAMPVLSPVEPSQPPQLSPPLAAPSGPLANAQNSHGSNGIDEKLAKEDGLGTKSSDQVSSKNPLDTDSSTPALYSKKDGLRCNKRKKKTIDNTGRRRKECVEIAESLRWLTEAMIRSEQARMDTMKEIERMRVEAEAKRGEMDLKRTEIIANTQLEIARIFASVNNKGVDSSLRIGRS* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1956 340 MobiDBLite consensus disorder prediction 169 242 - -
Gso15g1956 340 Gene3D - 55 120 - -
Gso15g1956 340 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 32 336 - -
Gso15g1956 340 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 32 336 IPR044823 -
Gso15g1956 340 MobiDBLite consensus disorder prediction 1 21 - -
Gso15g1956 340 MobiDBLite consensus disorder prediction 170 184 - -
Gso15g1956 340 MobiDBLite consensus disorder prediction 1 38 - -
Gso15g1956 340 MobiDBLite consensus disorder prediction 214 235 - -
Gso15g1956 340 Pfam Myb/SANT-like DNA-binding domain 52 141 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1956 Gso-Chr15 43822465 43825579 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso15g1956 Myb_DNA-bind_4 2.2e-19 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1956 15 43822465 43825579 Gso11g2272 11 38547650 38551554 GST