Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1942 ATGGCAGCAGAAATGGTTGCTGGTGCTCTTGTTTCTACTTTCGTTCAGATGACAATTGACAGTTTGGCTTCTCGTTTTGTGGACTACTTTCGTGGAAGAAAACTCAATAAGAAGCTGCTGAGTAACTTGAAGGTGAAGCTACTAGCCATCGATGTTCTTGCTGATGATGCAGAACTTAAGCAGTTCAGAGATGCACGTGTCAGAGATTGGCTTTTTAAGTCCAAAGATTTAGTGTTTGAAGCAGAGGATCTCTTGGAAGAAATAGACTATGAACTCTCCAAATGCCAAGTAGAAGCTGAATCCCAGCCCATTCTTAACAAGGTGAGCAATTTCTTCAAACCTTCTTCTTTGAGCTCTTTTAACAAGGAAATTGAATCAAGGATGGAACAAATCCTTGATGACCTGGATGATCTTGAAAGCCAAAGTGGTTATCTAGGTTTGACAAGGACCCGTGGTGTTGGGGTTGGATCAGGATCGGGTAGTAAAGTGTTAGAAAAATTGCCATCAGCATCTTCGGTGGTAGAAAGTGATATTTATGGCAGAGATGATGACAAAAAATTGATCTTCGACTGGATCAGTTCTGACACTGATGAAAAGCTATCAATACTTTCTATTGTGGGCATGGCCGGGTTGGGTAAGACCACGCTTGCCCAACTTGTATACAATGACCCAAGAATAGTGTGTAAGTTTGATGTCAAAGCTTGGATCTGTGTTTCAGAAGAATTTGATGTTTTCAATGTATCAAGAGCAATTCTTGAGACTATTACTGATTCGACTGATCATGGTAGAGAGCTAGAAATAGTTCAGAGAAGACTAAAAGAAAAATTGGCAGATAAAAAATTTCTCCTCGTTTTGGATGACGTTTGGAACGAAAGCAGGCCTAAATGGGAAGCTGTGCAGAATGCTCTTGTTTGTGGAGCTCAGGGAAGTAAGGTCCTTGTCACAACACGCAGTAAGGAAGTTGCTTCTACCATGCGGTCAAAAGAACAAAGGCTGGAGCAATTACAAGAAGATTATTGCTGGCAATTGTTTGCAAAACATGCATTCAAAGATGATAATCTTCCACGAGATCCAGTATGCCCAGAGATTGGTATGAAGATTGTTCAAAAATGTGAAGGACTTCCTCTAGCCTTGAAGTCAATGGGAAGTCTATTACACAACAAACCATTTGCCTGGGAATGGGAAAGCGTGTTGCAAAGCGAAATATGGGAATTAAAGGACAGTGATATTGTTCCTGCTTTAGCATTGAGCTATCACCACCTTCCTCCCCATCTCAAGACATGCTTTGCTTACTGTGCTTTATTCCCCAAGGATTATGTGTTTGACAGGGAGTGTTTAATTCAGTTGTGGATGGCTGAAAATTTCCTAAACTGCCATCAACGCAATAAGAATCCAGAAGAAGTTGGCCAACAGTACTTCAATGGTCTACTATCAAGGTCCTTCTTTCAACAATCAAGCAAATATAAAGAAGTATTTGTCATGCATGACCTTCTAAATGATTTGGCAAAATATGTTTGTGGGGACATCTATTTCAGGTTGGGAGTTGATCAAGCAAAAAGTGCACAGAAAACAACCCGACATTTTTCATTTTCGATCATTACCAAACCATTTTTTGATGAGTTTGGAACTTCATGTGATACTAAAAAGTTGCGTACATTTATGTCAACAAGGTGTAGAACTGATGAATATGACCATAGTTGGCATTGGAATGTGTCCATACATGAATTGTTCTCCAAATTTAAGTTCTTACGTGTCTTATCTCTGTCTCATTGTATAAACATTAATGAGCTGCCTGACACTGTTTGCAATCTTAAACATCTTCGTTCATTAGACCTTTCCTATACTAGCATAAAAAAACTACCTGATTCAACATGTTCACTCTCCAACTTGCAAATACTGAATGTGAACTATTGTGGATCTTTGAAGGAGCTGCCCTCGAATTTGCATGAACTCACCAATTTGCATTGCCTTGAAGTTGTTTATACTAATCTGATAAAGGTGCCACCGCATCTGGGAAAGCTGAAGAATCTTCAAGTATCCATGAGTTCTTTTGATGTTGGCAAAAGTAGCGAGTTCACTATTCAACAATTAGGAGAGCTCAATCTTCATGGAACATTGTCATTTAGGGAGCTGCAGAATATTGAGAATTCCTCAGATGCATTAGCTGCAGATTTGAAAAATAAAACGCGCCTTGTGGAACTAAAGTTAGAATGGAATTCGGACTGGAAGCCTGATGATTCTGCCAAAGAAAGGGATGTAGTTGTAATTGAGAATCTACAACCTTCCAAACACCTGGAGAAGTTGTCAATCATCAACTATGGTGGTAAACAATTCCCAAATTGGTTATCCGATAATTCTTTATCAAATGTGGTGTCCTTAATGTTGGGCAACTGTCAATCTTGTCAACGTTTGCCTTCCCTTGGACTTTTGCCATTTCTCAAGAACCTTGAGATTTCAAGGCTTGATGGGATAGTGAGCATTGGTGCTGATTTTCATGGCAATAGCTCCTCTTCATTTCCATCGTTGGAAACATTGAAGTTCTCCTCTATGAAAGCATGGGAAAAATGGGAATGTGAAGCTGTGACAGGTGCTTTTCCATGTCTTCAATATCTTTATATAGGCAAATGTCCCAAGCTGAAAGGTGACCTCCCAGAGCAACTTCTTCCTTTAAAGAAGCTAGAAATTAGTGAGTGCAAACAACTTGAGGCTTCAGCTCCCTGGGCTCTAGAACTATACCTGAAAGACTTTGGAAAGCTGCAACTTGACTGGGCTTATTTGAAAAAGCTCAGCATGGGCGGACACAGCATGGAAGCATCGTTGCTGGAAAAGTCTGATACTTTGAAAGAACTGGAAATTTATTGTTGCCCGAAATATGAAATGTGTTGCGATTGTGAAATGAGTGATAATGGCTTTGGCTCTCAAAAGACTTTTCCGCTAGATTTCTTCCCAGCACTCAGGACCCTTCATCTCAGAGGCTTTCGTAATCTACAGATGATTACACAGGATCACACCCATAATCATCTTGAAGTTCTGGCATTCGATGAGTGCCCTCAATTAGAATCATTGCCTGGAAGCATGCATATACTGCTTCCATCTCTGAAGAAGCTAGTAATAGAAGATTGTCCAAGAGTTGAGTCGTTCCCTGAAGGAGGTTTGCCATCAAATCTAAAAGAGATGCGACTCTATAAATGCTCGTGGGGACTCATGGCCTCACTGAAAGGGGCTTTGGGAGACAATCCCTCTCTGGAAACCTTGCACATAGGAGAGCTGGATGCGGAATCTTTTCCTGATGAAGGCTTGCTGCCACTCTCTCTTACTTGTCTATGGATCTATGTTTTTCGAAATCTGAAAAAACTGGACTACAAGGGGCTCTGTCAGCTCTCCTCTCTCAAGGAATTGAATATTATAGACTGCCCCAACCTCCAACAGCTACCCGAGGAGGGTCTTCCCAAATCCATTTCATTTCTTTTAATTGATGGCTGCCGCAACCTCGAGCAGCGTTGCCAGAACCCAGGAGGCGAAGACTGGCCAAAGATTGCTCACATTCCAACCCTGTATATTTCGTATGATAGTGATAGTGATGCTGATTTTTAA 3594 0.4087 MAAEMVAGALVSTFVQMTIDSLASRFVDYFRGRKLNKKLLSNLKVKLLAIDVLADDAELKQFRDARVRDWLFKSKDLVFEAEDLLEEIDYELSKCQVEAESQPILNKVSNFFKPSSLSSFNKEIESRMEQILDDLDDLESQSGYLGLTRTRGVGVGSGSGSKVLEKLPSASSVVESDIYGRDDDKKLIFDWISSDTDEKLSILSIVGMAGLGKTTLAQLVYNDPRIVCKFDVKAWICVSEEFDVFNVSRAILETITDSTDHGRELEIVQRRLKEKLADKKFLLVLDDVWNESRPKWEAVQNALVCGAQGSKVLVTTRSKEVASTMRSKEQRLEQLQEDYCWQLFAKHAFKDDNLPRDPVCPEIGMKIVQKCEGLPLALKSMGSLLHNKPFAWEWESVLQSEIWELKDSDIVPALALSYHHLPPHLKTCFAYCALFPKDYVFDRECLIQLWMAENFLNCHQRNKNPEEVGQQYFNGLLSRSFFQQSSKYKEVFVMHDLLNDLAKYVCGDIYFRLGVDQAKSAQKTTRHFSFSIITKPFFDEFGTSCDTKKLRTFMSTRCRTDEYDHSWHWNVSIHELFSKFKFLRVLSLSHCININELPDTVCNLKHLRSLDLSYTSIKKLPDSTCSLSNLQILNVNYCGSLKELPSNLHELTNLHCLEVVYTNLIKVPPHLGKLKNLQVSMSSFDVGKSSEFTIQQLGELNLHGTLSFRELQNIENSSDALAADLKNKTRLVELKLEWNSDWKPDDSAKERDVVVIENLQPSKHLEKLSIINYGGKQFPNWLSDNSLSNVVSLMLGNCQSCQRLPSLGLLPFLKNLEISRLDGIVSIGADFHGNSSSSFPSLETLKFSSMKAWEKWECEAVTGAFPCLQYLYIGKCPKLKGDLPEQLLPLKKLEISECKQLEASAPWALELYLKDFGKLQLDWAYLKKLSMGGHSMEASLLEKSDTLKELEIYCCPKYEMCCDCEMSDNGFGSQKTFPLDFFPALRTLHLRGFRNLQMITQDHTHNHLEVLAFDECPQLESLPGSMHILLPSLKKLVIEDCPRVESFPEGGLPSNLKEMRLYKCSWGLMASLKGALGDNPSLETLHIGELDAESFPDEGLLPLSLTCLWIYVFRNLKKLDYKGLCQLSSLKELNIIDCPNLQQLPEEGLPKSISFLLIDGCRNLEQRCQNPGGEDWPKIAHIPTLYISYDSDSDADF* 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1942 1197 ProSiteProfiles Leucine-rich repeat profile. 606 627 IPR001611 GO:0005515
Gso15g1942 1197 Gene3D Ribonuclease Inhibitor 545 960 IPR032675 -
Gso15g1942 1197 Pfam Rx N-terminal domain 11 102 IPR041118 -
Gso15g1942 1197 SUPERFAMILY L domain-like 968 1180 - -
Gso15g1942 1197 Coils Coil 318 338 - -
Gso15g1942 1197 Gene3D - 162 334 IPR027417 -
Gso15g1942 1197 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 432 IPR027417 -
Gso15g1942 1197 Pfam NB-ARC domain 183 399 IPR002182 GO:0043531
Gso15g1942 1197 PANTHER OS05G0414200 PROTEIN 20 1025 - -
Gso15g1942 1197 Gene3D - 15 139 - -
Gso15g1942 1197 SUPERFAMILY L domain-like 493 903 - -
Gso15g1942 1197 Gene3D - 412 504 IPR036388 -
Gso15g1942 1197 PRINTS Disease resistance protein signature 202 217 - -
Gso15g1942 1197 PRINTS Disease resistance protein signature 275 289 - -
Gso15g1942 1197 PRINTS Disease resistance protein signature 371 385 - -
Gso15g1942 1197 PRINTS Disease resistance protein signature 885 901 - -
Gso15g1942 1197 PANTHER DISEASE RESISTANCE PROTEIN RP 20 1025 IPR044974 GO:0006952
Gso15g1942 1197 Gene3D Ribonuclease Inhibitor 961 1192 IPR032675 -
Gso15g1942 1197 Coils Coil 121 141 - -
Gso15g1942 1197 CDD AAA 179 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1942 Gso-Chr15 43457036 43460997 Dispersed/Tandem