Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1932 ATGGAAGACGGCAAGCCCATGAATGGCGGCGACCAAGTCGAGTCTCGCTTCGTCGAGTTCTGCAAGAATGGGCTAGCATTGGAAGAGAAAAGCTGTAAAAAAGCAAAGAATCTGTTTGGTGAAACCAAGCATATTCTACTGTCAAATTTTTCGTCAATGGGGAATGGAACGTCTGAAGAAGCAGAGAGGTATTGGTTTGCTTTCATTTTGTACTCTGTCAAGAAATTGATCCAGAAAAATGAGGAGGGTGGGAAGGAAGACGCCGAGAACACTGGGCTTAGTTTGTGCCGTATATTGAGAGCAGCTAAGCTTAACATTGCAGATTTTTTTAAAGAACTTCCACAGTTTGTTGTTAAAGCTGGTCCAACTTTAAGTAATCTATATGGCACAGATTGGGAAAACAGGCTTGAGGCGAAAGAGATGCATGCCAATGCTATTCACTTGAAGATTCTTAGCAAGTACTATAAACGTGTGTTTGGAGAGTTCTTCGTGTCAACTGACACAAATGCTGAAAAAAACTCATCTATTACTGTTCATGCATCTGAATATCATCGATTTGGATGGCTGCTTTTCTTGGCACTTCGTGTACATGCTTTCAGCCGTTTCAAAGACTTAGTGACTTGCACTAATGGTTTGATTTCAATATTGGCCATCTTAATTATCCATGTTCCTACTCGTTTTCGGAATTTCAACATCCATGACTCCTCACGCTTTGTTAAGAAAAGTAACAAAGGTGTGGACCTCCTTGCATCACTTTGCAACATATACAACACTTCTGAAGATGAGTTGAGGAAAACCATGGAGAAAGCCAATAATGTAATAGCAGATATATTGAAGAAGCAGCCTTGCTTGGCATCTGAATGCGAAACCGAAAACCTAGAAAATATCGATAAAGATGGTTTGACCTATTTTAAAGACTTGATGGAAGAATCTTCTCTACCTTCTAGTTTAAATATGCTAGAAAAGGACTATGATTACATGATTCGAAATAAGAGTGAATTGGATGAGAGGTTATTCATTAATGAGGATGACAGCCTATTAGCTTCAGTAAGCTTGTCTGGAGGTTCTGTTTCAGTAGGTGGTGTAAAGAGGAAATTTGATTCGATGGCATCGCCTGCTAAAACCATTACAAGTCCACTCTCACCTCACCGCTCCCCCACATCACATACTAATGGCATCCCGGGTAGTGCAAACTCAAAGATGGCAGCCACCCCTGTAAGCACAGCAATGACTACTGCAAAGTGGCTTCGAACTGTCATTTCTCCACTTCCATCGAAGCCCTCGCCAGAGCTGGAACGATTTTTGACATCATGTGATAGGGATGTTACGAGTGATGTGGTTCGCAGAGCACAGATTATATTGCAGGCTATATTTCCTAGTAGTCCTCTTGGAGAACGATGTGTAACCGGAAGCCTGCAAAGTGCAAACCTTATGGACAATATATGGGCTGAACAACGAAGATTGGAAGCACTGAAGTTATACTACAGGGTATTGGAAGCAATGTGCAGAGCAGAAGCCCAAGTATTTCATGCAACTAATTTAACCTCTCTACTTACCAATGAGAGGTTCCATCGGTGTATGCTTGCGTGTTCTGCAGAATTAGTCCTGGCAACTCACAAGACTGTAACAATGTTGTTCCCTGCAGTACTAGAGAGGACTGGAATTACAGCCTTTGATCTTAGCAAGGTGATTGAAAGTTTCATTAGACATGAAGAATCTCTCCCAAGAGAATTGAGGCGACATCTGAATTCATTGGAAGAACGACTTTTGGAGAGCATGGTATGGGAAAAGGGTTCTTCAATGTATAACTCTTTGGCAGTTGCCAGACCTTCCCTTTCTGCAGAGATAAATCGTCTTGGACTGTTAGCTGAACCAATGCCATCATTGGATGAAATTGCAATGCATATTAACTTCTCTTGTGGAGGACTGCCACCAGTGCCTACCTTGCCCAAGCTTGAAAGTTCTCCAACTCAGAATGGGGATATCAGATCACCAAAGCGAAATGTTTTAATGGAAAGAAATTCTTTCACTTCACCAGTGAAAGATCGCCTTCTTCCCTTCAACAGCCTTAAGTCAAAACTACCCCCACCTCCTTTGCAGTCAGCATTTGCCAGCCCCACAAAGCCAAATCCAGGAGGTGGAGGGGAAACATGTGCAGAAACTGGGATCAACATCTTTTTTGGCAAGATCATTAAGTTGGGAGCAGTCAGAATAAGTGGCATGGTTGAAAGGCTACAATTATCTCAGCAGATTAGGGAGAATGTATACTGTCTTTTCCAGCGGATCCTAAATCAATGGACATCTCTCTTTTTCAACCATCATATTGACCAAATCATCTTGTGTTGTTTCTATGGAGTTGCAAAGATTTCACAACTGAACCTAACTTTTAAGGAGATTGTATACAACTACAGAAAGCAACCACATTGCAAAACACAAGTTTTTCGTAGTGTATTTGTTGATTGGTCATTGGCCCGCCGAAATGGGAGAACAGGACAGGATCATGTTGACATCATTACCTTTTACAATGAAATATTCATTCCTTCTGTAAAGCCACTGCTGGTTGAACTTGGCCCTGCTGGACCAACCACGAAAAGTGATCGCATACCTGAAGTTAATAATAAAAATGATGGCCATTTAGCTCAATGTCCAGGATCTCCTAAAATATCACCTTTCCCAACCCTTCCTGATATGTCTCCAAAAAAAGTGTCAGCCACACACAATGTATATGTCTCTCCATTACGATCATCCAAGATGGAAGCCCTAATATCACACAGCTCAAAAAGCTATTATGCATGTGTTGGGGAAAGCACTCATGCATATCAGAGCCCTTCAAAAGACCTGACAGCCATCAATAACCGTTTAAATGGCAACCGGAAGGTGAGAGGTCCCCTCAACTTTGATGATGTTGATGTGGGGTTGGTGAGTGATTCTATGGTTGCAAACAGCCTCTATCTGCAGAATGGAAGCTGTGCATCATCATCAGGTGCACCATTGAAATCAGAGCAGCCTGACTCCTAG 3018 0.4205 MEDGKPMNGGDQVESRFVEFCKNGLALEEKSCKKAKNLFGETKHILLSNFSSMGNGTSEEAERYWFAFILYSVKKLIQKNEEGGKEDAENTGLSLCRILRAAKLNIADFFKELPQFVVKAGPTLSNLYGTDWENRLEAKEMHANAIHLKILSKYYKRVFGEFFVSTDTNAEKNSSITVHASEYHRFGWLLFLALRVHAFSRFKDLVTCTNGLISILAILIIHVPTRFRNFNIHDSSRFVKKSNKGVDLLASLCNIYNTSEDELRKTMEKANNVIADILKKQPCLASECETENLENIDKDGLTYFKDLMEESSLPSSLNMLEKDYDYMIRNKSELDERLFINEDDSLLASVSLSGGSVSVGGVKRKFDSMASPAKTITSPLSPHRSPTSHTNGIPGSANSKMAATPVSTAMTTAKWLRTVISPLPSKPSPELERFLTSCDRDVTSDVVRRAQIILQAIFPSSPLGERCVTGSLQSANLMDNIWAEQRRLEALKLYYRVLEAMCRAEAQVFHATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLAVARPSLSAEINRLGLLAEPMPSLDEIAMHINFSCGGLPPVPTLPKLESSPTQNGDIRSPKRNVLMERNSFTSPVKDRLLPFNSLKSKLPPPPLQSAFASPTKPNPGGGGETCAETGINIFFGKIIKLGAVRISGMVERLQLSQQIRENVYCLFQRILNQWTSLFFNHHIDQIILCCFYGVAKISQLNLTFKEIVYNYRKQPHCKTQVFRSVFVDWSLARRNGRTGQDHVDIITFYNEIFIPSVKPLLVELGPAGPTTKSDRIPEVNNKNDGHLAQCPGSPKISPFPTLPDMSPKKVSATHNVYVSPLRSSKMEALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGNRKVRGPLNFDDVDVGLVSDSMVANSLYLQNGSCASSSGAPLKSEQPDS* 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1932 1005 Pfam Domain of unknown function (DUF3452) 87 222 IPR024599 -
Gso15g1932 1005 Gene3D - 407 595 - -
Gso15g1932 1005 PANTHER BNACNNG22930D PROTEIN 10 992 - -
Gso15g1932 1005 Gene3D - 183 341 - -
Gso15g1932 1005 Pfam Retinoblastoma-associated protein B domain 723 850 IPR002719 GO:0005634|GO:0051726
Gso15g1932 1005 PANTHER RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED 10 992 IPR028309 GO:0006357|GO:0051726
Gso15g1932 1005 SMART RB_A_2 404 605 IPR002720 GO:0005634|GO:0051726
Gso15g1932 1005 Pfam Retinoblastoma-associated protein A domain 404 605 IPR002720 GO:0005634|GO:0051726
Gso15g1932 1005 SUPERFAMILY Cyclin-like 721 862 IPR036915 -
Gso15g1932 1005 Coils Coil 260 280 - -
Gso15g1932 1005 SUPERFAMILY Cyclin-like 412 607 IPR036915 -
Gso15g1932 1005 Gene3D - 684 874 - -
Gso15g1932 1005 MobiDBLite consensus disorder prediction 376 400 - -
Gso15g1932 1005 SMART DUF3452_2 74 222 IPR024599 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1932 Gso-Chr15 43120796 43128670 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR RB Gso15g1932 RB_A 9.7e-65 CL0065