Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1914 ATGGCCACCGAAAAGCTTAGAGGTTGTGCAAATGTTTTTGCAAGCTCTAAACCCTACTTGGCCATGATCTCTTTACAATTTGGCTATGCAGGCATGAACATTATCACTAAGGTTTCTCTCAACCAAGGCATGAGCCACTATGTCCTTGTGGTCTATCGCCACGCTTTTGCCACCGCTGTCATAGCTCCTTTTGCCATTATTTTTGAAAGGAAAGGTCAACCGAAGATAACATTCCCAGTTTTCATGCAAATTTTTATTCTTGCTCTTCTTGGGCCTGTGATTGATCAAAATTTCTACTATGCTGGGTTGAAGCTCACATCCCCAACCTTCTCATGTGCAATGAGCAACATGCTTCCAGCCATGACTTTTGTGATGGCAGTGTTTTGCCGGATGGAGAAGATAGAAATAAAGAAGGTGAGATGCATGGCAAAGATAGTGGGAACATTAGTCACAGTGGCAGGGGCTATGCTGATGACCTTATATAGAGGTCCTATAGTGGAGATGGTATGGGCCAAACATCCACACAATAAAACCAATGCAACAACCACGACAGAATCATTTGACAAAGATTGGTTCTTAGGATGCACCTTTCTTATCATTGCCACCCTAGCTTGGGCATCCCTATTTGTTTTACAAGCCAAAGCTATTCAGACGTACAAGAATCATCAGTTAAGTCTAACTTCACTTGTGTGCTTTATTGGCACTCTTCAAGCTATTGCTGTTACTTTTGTTGTTGAACACAATCCTTCTGTATGGAGAATTGGCTGGGATGTGAGCTTACTTGCTGCTGCATATGCTGGGATTGTGACATCAAGCATATCATACTATGTACAAGGACTGGTAATTAAGATGAAAGGACCTGTCTTTGCAACTGCCTTTAGCCCTTTAATGATGATCATTGTGGCCATCATGGGATCCTTCATCCTTGCGGAACAAATTTATCTTGGAGGTGTAATTGGTGCCATCTTAATCGTTATAGGGTTATACTCAGTTCTGTGGGGAAAGCACAAAGAACAAATAGAGAGCAAAGTGGCAGATGAAATTCCCTTGCCTGTAAAAGATGCTCAAATTGCTGTAATTGCAGGGCCAATGATTGATGCCACAGATAATTTTACTGAAGAAAAATATGGTCAGAAAGGAGAAGCCAACAACAACAAGCTCTCTTCACACATAATAACTATGCCTATTCCAGAGCTTCCCACTAAAGCTAACCAAGAGAGAAAGACTTGA 1230 0.4163 MATEKLRGCANVFASSKPYLAMISLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAFATAVIAPFAIIFERKGQPKITFPVFMQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFVMAVFCRMEKIEIKKVRCMAKIVGTLVTVAGAMLMTLYRGPIVEMVWAKHPHNKTNATTTTESFDKDWFLGCTFLIIATLAWASLFVLQAKAIQTYKNHQLSLTSLVCFIGTLQAIAVTFVVEHNPSVWRIGWDVSLLAAAYAGIVTSSISYYVQGLVIKMKGPVFATAFSPLMMIIVAIMGSFILAEQIYLGGVIGAILIVIGLYSVLWGKHKEQIESKVADEIPLPVKDAQIAVIAGPMIDATDNFTEEKYGQKGEANNNKLSSHIITMPIPELPTKANQERKT* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1914 409 PANTHER WAT1-RELATED PROTEIN 12 370 - -
Gso15g1914 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 337 - -
Gso15g1914 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 160 - -
Gso15g1914 409 Pfam EamA-like transporter family 18 158 IPR000620 GO:0016020|GO:0016021
Gso15g1914 409 Pfam EamA-like transporter family 193 332 IPR000620 GO:0016020|GO:0016021
Gso15g1914 409 PANTHER WAT1-RELATED PROTEIN 12 370 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1914 Gso-Chr15 42263197 42266393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1914 1 402 Nodulin-like Gene Family AT5G07050 64.320 0.0 528