Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1909 ATGAGTTCTGCTTATCATCCTCAGTCGGATGGCCAAACAGAGGTGTTGAATAAGACACTAGAGATGTACTTGAGATATTTTGTGTTTGATCATCCTAAAACTTGGTTTGAGATGCTTCCTTGGGCTCAACTTTGGTACAACACTTCCTTTCATCACAACATTGGTATGTCTCCCTTTAAGGCTGTTTATGGTAGGGATCCACCATCTGTTATTCCTTATGAATTGGGTGAAAGTGGTCCAATGGTTCAACCCATAGCAGTATTGGATTCAAGGGTGTTATTGAGAGACTCTTCTCAAGTGGAACAAGTGTTGATTCAATGGGAAATTGCTGGTCCTGAGGAAGCTACATGGGAGGATGTGACTTGGGTTAAGGCAAGTTATCCTCACTTCAACCTTGAGGACAAGGTTGTTTATAAAGGGGAGGGTAATGTAACATGTGGGAAGCAGGAAGGAAAATTGGTCATGTTGATGGTGAACACTCTTCCTGATTGCTTCTCTGATCCTTCTGATATTTCCTTCTTCTCTATACCTTCTCTGAACCTTTCTGCTCTCCCTAATCTTCAGGTTCAAAGGATAAATAGTGCATATTTCCTAAAAGTTAATGCAATTTACCAACAGATGAATAGAAAACTTCAACAGCTTGAGTCTTCTCCTCAAGAACCAAACACATTGGAAAGAATAAGATTCAGTATGAAAGTATTAGAAAATCTTTTGGCACTCTTAAGTGTGAATAAATTCCAGATTACCACTAAATTCAAGGAGAAACTAGATAAAGTAGAAAAGTTTATACTACGTAACTTTTTCTCAAAGAATGTTTCTTCACGTTCTCAAGGACAACAACCTTTAGCTGATGTGCAATCCAGGCAACAATCTGATCCATCACATTCTAGTATTTCTCCATCGAAAATACTTGAAACAAAAACATCACCACAATCATTGGGGACACAAAACTATCATATGATGATGAATCTTTCTCGGCAAAAGAATATGTGTTTGCAAGAGCAGCAAGTGGCAAAAGAATATAGAAATTCACAACAGTCTGGTCCATCACATTCTTGTATTTGCCTAGTGAAAATACTTGAAACGAAACCATTACCACAATCATTGGCAACACAAAACTATCATATGATGAAGGATGTTTCTCAAAAAAAGAAGATGTATTTACAAGAGCAGCAAGTGGCCAAACAATATAGCAATTCACAACAGTCTGGTCCATCACATTCTAATATTTGCCCAGTGAAAATACTTGAAACGAAACCATCACCACAATCATTGGGAACACAGAACTATCATATGGTGAAGGATGTTTCTCAGCAAAAGAAGATGTGTTTACAAGAGCAGCAAGTGGCCAAACAATATAGCAACTCACAACAGTCAGGTCCATCACATTCTAGTATTTGCCCAGTGAAAATACTTGAAACAAAACCATCACAACAATCATTGGGAACACAGAACTATCATCTGATGAAGGATGTTTCTCAGCAAAAGAAGATGTGTTTACAAGTGCAGCAAGTGGCCAAACAATATAGCAATTCAGAACAGTCAGCTTCACCCTTGATTGAAAACAGCAATATGCTTAAAGAAATTTCCTGTAAACCTACACTCACTTCTGATGAGCCGAGTGCTGCAATGCAATGCTTTCTTAAAGTGTTAACCTCCAGTTCACCTGAAGCATTAAATGCATCGCTTGGTGAAATTAGAAAGGTAGTCCATTTGAATGATGTGATACCAAGTTCAGAATTGATAAATGGACTAGGGACAAATTTAGCATCGGATATTGAGCCATTTTCACAAGATAGATACATCACTTGCAATGGTTTTGTTCCAAGGGGAAGGAAGAGGTCTCGCAGCATGATTTCAATGACTGCCTTTGGCACTTCTAGTATTTATACTAGTTCATGTGACAGTAACCAGTTGACTGATGCTGAGAAACCTGACTTGACTTTAGTCACATCTACAATAAAGCATCCTAGAATTGTGGAAAAATGTTCTCTCTTAGAAGAAATAAAGGAGATAAATAAACTATTGATAGACAATGAGATAGTTATTGGAGAAAAAGACAGCATTCAAAGTGCAGCTGGAGGAGCTGCTGAAGACGCTGAAGGATTGGTTATTAAATTCTTTTTCAATGTAGTAACTTGCAATCAGAACCTAATATCCCATCTCTCTGCTGATAAAAAGTCAATAATCAAACCGTTGTGGTTGCTTGTTCCCGAAAGTTATTCATTTTGCCCACCTGTTGTTTTAGACAAAATGCCGTTGGAAGTATTAAAGATATAA 2280 0.3772 MSSAYHPQSDGQTEVLNKTLEMYLRYFVFDHPKTWFEMLPWAQLWYNTSFHHNIGMSPFKAVYGRDPPSVIPYELGESGPMVQPIAVLDSRVLLRDSSQVEQVLIQWEIAGPEEATWEDVTWVKASYPHFNLEDKVVYKGEGNVTCGKQEGKLVMLMVNTLPDCFSDPSDISFFSIPSLNLSALPNLQVQRINSAYFLKVNAIYQQMNRKLQQLESSPQEPNTLERIRFSMKVLENLLALLSVNKFQITTKFKEKLDKVEKFILRNFFSKNVSSRSQGQQPLADVQSRQQSDPSHSSISPSKILETKTSPQSLGTQNYHMMMNLSRQKNMCLQEQQVAKEYRNSQQSGPSHSCICLVKILETKPLPQSLATQNYHMMKDVSQKKKMYLQEQQVAKQYSNSQQSGPSHSNICPVKILETKPSPQSLGTQNYHMVKDVSQQKKMCLQEQQVAKQYSNSQQSGPSHSSICPVKILETKPSQQSLGTQNYHLMKDVSQQKKMCLQVQQVAKQYSNSEQSASPLIENSNMLKEISCKPTLTSDEPSAAMQCFLKVLTSSSPEALNASLGEIRKVVHLNDVIPSSELINGLGTNLASDIEPFSQDRYITCNGFVPRGRKRSRSMISMTAFGTSSIYTSSCDSNQLTDAEKPDLTLVTSTIKHPRIVEKCSLLEEIKEINKLLIDNEIVIGEKDSIQSAAGGAAEDAEGLVIKFFFNVVTCNQNLISHLSADKKSIIKPLWLLVPESYSFCPPVVLDKMPLEVLKI* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1909 759 Gene3D - 1 79 IPR036397 GO:0003676
Gso15g1909 759 MobiDBLite consensus disorder prediction 275 314 - -
Gso15g1909 759 SUPERFAMILY Ribonuclease H-like 1 60 IPR012337 -
Gso15g1909 759 ProSiteProfiles Integrase catalytic domain profile. 1 66 IPR001584 GO:0015074
Gso15g1909 759 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 190 310 - -
Gso15g1909 759 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 440 754 - -
Gso15g1909 759 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 190 310 IPR044661 GO:0003713|GO:0031490
Gso15g1909 759 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 440 754 IPR044661 GO:0003713|GO:0031490
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1909 Gso-Chr15 42071581 42076019 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1909 15 42071581 42076019 Gso11g2225 11 37950503 37960510 GST