Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1908 ATGTCTCCATCAGCGAAATCAAAATCCAAGTCCCAGGAGAAGGCCTCTGCAAGGGGGGGTAAGGAACAACATAAGACTTCTCCAAAGACTTCCAAGTCTCCAACTCATGGGAGTGGCACTCCTGCTAGTGCACACAATCCCATCTCGGGAACATTTCAAACTCCAGAAACATCATTGGTTGCTTCCTCTACTCAAGTTCATGACAACAGTCATTTCCCAAAAATAGATGATGCAGATGAGCATTCTAGAAGTCCTCAAGGAATGGTGTCTGAATGTGATTCGGTTTCTAACAATGGTAGCTGCTCTGGTGAATCAGAAGAGTCTAAAGAGAAGGTAACAGTAACAAACTCTTCTACTCAGCCAGACAGTATACTTGGTTGTGATAATGATAGAAGGGAGAAGATCCGCTTGAAGAACGAGAGGAAGCACCAGAGGCAGAGGGAAAGGAGAGCACAGGAGTTGCATGACCGTTGTTGCGGGTACCTAATGTCAAGAAAGCTAGAATCACTTGCACAGAAGTTAGTGGCGATGGGGTTCTCTTCTGAGCGAGCGACGTTGGCCTTAATGTTAAATGACGGAAAATTAGAGCAATCAGTTTCCTGGCTATTTGAAGGGAGTGAAGAACAATCACAAAGCAAGGATACTACTAGCCTTATAAGTGAGGGTAATATGAAAATTGACATACGTGATGAGCTTGCTCAGATATCTGCCCTGGAGGTAAAGTACAATTGTTCAAAGCAAGAGGTTGAAAGAGCAGTTGTTGCTTGTGAAGGTGATCTTCAAAAGGCAGAAAATACCTTAAGAACACAGAATCAGGAATTTCCTACAACCCAATCGAAGTCAGAAGATTCTGCTCAAAATAATAGTAGTCTGGTGAGATCACAAGGATCACCAGCAGCATCGGTTTCAATGCAGCACAGAGGGAATGAAAATGACTTTAACCATTACAACAGGGTAGGTGGTTCAGATTCCATGTTTCCGGATGTTGAAACCGGGAATGTACATTCTCTACAATCGAATCATCCAAATTTAATGACTGAGAAAAGATGGAGTGGTGTTCCAGGATCAAGCCTGTCTGCTATGTTTGCCATGGCACCATCCATGCAAGCAGTGCCTCCATTTGTTAAAATGGAGGGCGGATGGCCTATTTCCCTTGCAAATGAAGGAAGAATGATTCAACAAGGAGTAGGAAGGGAGCCGGTAATGATGCAACATCCACAATTCACAAATGCCAAACAGAACTCTATGATGTCTTTAAATTCCTTTCCTTCAGGAGCAGCAGGTTGGTATGCAAATAGTATTCCAGGTGCTGACAATGTGAGATCAAATGGGAAGTTACTACAAACTCAAAGCATAAGAAGTGTGAGCCCAAATCATTTGGAGCAATTTGGTCAAGCTCCGTATAGGGAATATTCTCATTTCCTTGGACCAGTAGACTACTCATCTGCTGGAGTGGGTGGTTATTGCAAGCCAATGGGTGCATCATCATCACCTCCACCTACAATTCCTCCTCGGCATCAAGGTTCATGGAGCACGGGCGCGTCTTCACCATCGCTCATGGTGCCAACTTCCCTTGGACTATTTTCTGGTCATCAGAATGCAGCCAGAACATTCAACTCACATTCACACATGGATTGGAACACTGTGGGTTTCATGCCAGAATTTGACTACAGCAGCATAGATTGGAGTTTGAATGCGCCATCTTCTTCCGTGTCGGGTGGACTGTGGCTAGGGATCTCTTCAATGTTGAGAAACAGTTATGGGGATAGGAGGGGCAGTCAATGCATGAGTGGATTGCAAATGGCTAGGGAAACTTCATCATCTGGTGGATTGAGAGAGTGGACCACTCCTTTTGCTGGGAAGGACATATTCAGAGTTCCTAGGCAGTTTGTTACCTCTCCTCCTATGTAG 1911 0.4453 MSPSAKSKSKSQEKASARGGKEQHKTSPKTSKSPTHGSGTPASAHNPISGTFQTPETSLVASSTQVHDNSHFPKIDDADEHSRSPQGMVSECDSVSNNGSCSGESEESKEKVTVTNSSTQPDSILGCDNDRREKIRLKNERKHQRQRERRAQELHDRCCGYLMSRKLESLAQKLVAMGFSSERATLALMLNDGKLEQSVSWLFEGSEEQSQSKDTTSLISEGNMKIDIRDELAQISALEVKYNCSKQEVERAVVACEGDLQKAENTLRTQNQEFPTTQSKSEDSAQNNSSLVRSQGSPAASVSMQHRGNENDFNHYNRVGGSDSMFPDVETGNVHSLQSNHPNLMTEKRWSGVPGSSLSAMFAMAPSMQAVPPFVKMEGGWPISLANEGRMIQQGVGREPVMMQHPQFTNAKQNSMMSLNSFPSGAAGWYANSIPGADNVRSNGKLLQTQSIRSVSPNHLEQFGQAPYREYSHFLGPVDYSSAGVGGYCKPMGASSSPPPTIPPRHQGSWSTGASSPSLMVPTSLGLFSGHQNAARTFNSHSHMDWNTVGFMPEFDYSSIDWSLNAPSSSVSGGLWLGISSMLRNSYGDRRGSQCMSGLQMARETSSSGGLREWTTPFAGKDIFRVPRQFVTSPPM* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1908 636 PANTHER UBIQUITIN-ASSOCIATED/TRANSLATION ELONGATION FACTOR EF1B PROTEIN 1 636 - -
Gso15g1908 636 MobiDBLite consensus disorder prediction 11 29 - -
Gso15g1908 636 MobiDBLite consensus disorder prediction 494 515 - -
Gso15g1908 636 MobiDBLite consensus disorder prediction 87 103 - -
Gso15g1908 636 SUPERFAMILY UBA-like 168 209 IPR009060 GO:0005515
Gso15g1908 636 Gene3D - 128 217 - -
Gso15g1908 636 Coils Coil 246 273 - -
Gso15g1908 636 Coils Coil 127 147 - -
Gso15g1908 636 MobiDBLite consensus disorder prediction 70 86 - -
Gso15g1908 636 PANTHER DOMAIN PROTEIN, PUTATIVE-RELATED 1 636 - -
Gso15g1908 636 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 165 205 IPR015940 -
Gso15g1908 636 MobiDBLite consensus disorder prediction 266 321 - -
Gso15g1908 636 MobiDBLite consensus disorder prediction 266 318 - -
Gso15g1908 636 SMART uba_6 167 204 IPR015940 -
Gso15g1908 636 MobiDBLite consensus disorder prediction 30 69 - -
Gso15g1908 636 MobiDBLite consensus disorder prediction 1 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1908 Gso-Chr15 42049261 42053874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1908 4 635 EF-hand Containing Proteins AT5G12120 35.735 9.26e-91 292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1908 15 42049261 42053874 Gso11g2224 11 37941360 37944955 GST