Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1907 ATGGAGGGAAAACTACTAAATGTGAGATCAATATATTCCTTTCTTTTCCTGCTATTGCTAAGCTTCAAACCACATGTTACAAAGGCACAATCACCCAACTATGTGGGAGATGATTGCCAAAATACCACCCAACAAAAAGCTCTCAGCAGTGCATACAAAACCAACCTTAACAGTGTCCTCTCATGGCTCTCCACAGATGCAGCCACAAGCAAAGGCTACAACCACAACAGCTTTGGCAACAACACCTCTGGAGGAGATGCTTCTGATGCTGTGTATGGCCTCTATGATTGCCGCGGCGACATAGTCGGATACTTTTGTCAATTCTGTGTCTCTACTGCTTCCAGAGAAGTTCTTCAGCGCTGCCCCAATAGAGTATCTGCAATTGTGTGGTATGATTTCTGCATCCTGAGGTACTCTAATGAGAACTTCTTTGGGAATGTCACAGTGTATCCATCATGGCACGCCGTTCGACCGAAAATCGTGTCTAGTAAAGAAGAGATTCAGAAAGGTTTGGATTTTATGAGAGGTTTGATCAGAAAAGCAACTGTGGAGACCAATCTTTTGTACTTTATGGATGGCTTCAATTTGAGTTCCACTCAGAGAAGGTATGGCTTGGTGCAATGCAGTAGAGATCTCACAAATGATGGATGCAGAGAGTGTTTGGAGGCTATGTTAGCACAAGTTCCCAAATGTTGTGAACAAAATTTGGGGTGGCAAGTTTTGGCTGCAAGCTGTCTCATAAAGTATGATGATTATATTTTCTACCTTTTTCGCACTCAAGCATCTGATACACAAACAGCCAAACAAAGGGGTGCTAGTAAGTCAAGAATAATATTGATCATTGGCTTAAGTGTGCTGGGGGCAGTAGCTTTACTGTGTTTTAGTGTTTATTGCTTCTGGTTCAGGAAAAGAACTAGAAGAGGAAGAGGAAAAGATGGGAGGATACCTGATACCATACATCAATCATCATATCACAATGTTCAAACTGAGGAAACACTGAATACAGACCTGCCTACAATCCCATTAATCACAATTCTAAAGAGTACTGATAACTTTTCAGAAGCATCTAAGTTAGGGGAAGGTGGATATGGCCCTGTTTACAAGGGAATTCTACCAGATGGAAGACAAATTGCAGTCAAGAGACTCTCACAAGCTTCTGGTCAAGGCTCAGAAGAGTTCAAGAATGAAGTGATGTTTATAGCCAAATTGCAACATCGCAACCTTGTAAGACTTTTGGCGTGCTGCTTGGAGGGACATGAAAAGATACTTGTATATGAGTATTTGTCGAATGCAAGTCTCGACTTTCACCTGTTTGATGAGAGAAAAAAAAGGCAACTCGATTGGAATCTAAGATTAAGCATTATCAATGGCATAGCAAAAGGTCTTTTATACCTTCATGAGGACTCTAGACTCAAAGTTATTCATAGAGATCTCAAAGCTAGTAACATTCTGTTAGATGATGAAATGAATCCCAAAATATCAGATTTTGGATTGGCAAGGGCATTTGAAAAAGGCCAGAACCAGGCAAATACAAAACGAGTAATGGGCACCTATGGATACATGTCTCCAGAGTATGCTATGGAAGGATTGTTTTCAGTGAAATCTGATGTCTTCAGCTATGGAGTTCTTGTTCTAGAAATCATTTGTGGGAAAAAGAACAGTGGTTTCTATCTATCAGAATGTGGCCAAAGTCTTACTTTATATGCTTGGAAAATATGGTGTGCAGGAAAATGTTTGGAACTATTGGATCCAGTGCTGGAGGAATCTTGCATAGAGAGTGAAGTTGTGAAGTGCATACACATTGGTCTGTTGTGTGTTCAAGAAGATGCAGCAGATAGACCAACTATGTCCACTGTTGTTGTAATGCTAGCATGTGATAAAATGCCCCTTCCAAAACCTAACCAGCCTGCATTTTCAGTCGGAAGAATGACCTTAGAGGATGCCTCTACATCAAAAAGTTCCAAGAATCTTTCCATTAATGATGTAACAGTCTCTAACATTTTACCAAGGTAA 2013 0.4054 MEGKLLNVRSIYSFLFLLLLSFKPHVTKAQSPNYVGDDCQNTTQQKALSSAYKTNLNSVLSWLSTDAATSKGYNHNSFGNNTSGGDASDAVYGLYDCRGDIVGYFCQFCVSTASREVLQRCPNRVSAIVWYDFCILRYSNENFFGNVTVYPSWHAVRPKIVSSKEEIQKGLDFMRGLIRKATVETNLLYFMDGFNLSSTQRRYGLVQCSRDLTNDGCRECLEAMLAQVPKCCEQNLGWQVLAASCLIKYDDYIFYLFRTQASDTQTAKQRGASKSRIILIIGLSVLGAVALLCFSVYCFWFRKRTRRGRGKDGRIPDTIHQSSYHNVQTEETLNTDLPTIPLITILKSTDNFSEASKLGEGGYGPVYKGILPDGRQIAVKRLSQASGQGSEEFKNEVMFIAKLQHRNLVRLLACCLEGHEKILVYEYLSNASLDFHLFDERKKRQLDWNLRLSIINGIAKGLLYLHEDSRLKVIHRDLKASNILLDDEMNPKISDFGLARAFEKGQNQANTKRVMGTYGYMSPEYAMEGLFSVKSDVFSYGVLVLEIICGKKNSGFYLSECGQSLTLYAWKIWCAGKCLELLDPVLEESCIESEVVKCIHIGLLCVQEDAADRPTMSTVVVMLACDKMPLPKPNQPAFSVGRMTLEDASTSKSSKNLSINDVTVSNILPR* 671
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1907 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Gso15g1907 670 ProSiteProfiles Gnk2-homologous domain profile. 34 143 IPR002902 -
Gso15g1907 670 SMART serkin_6 352 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1907 670 ProSiteProfiles Gnk2-homologous domain profile. 149 254 IPR002902 -
Gso15g1907 670 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 668 - -
Gso15g1907 670 Gene3D - 33 143 IPR038408 -
Gso15g1907 670 Gene3D - 156 254 IPR038408 -
Gso15g1907 670 Gene3D Phosphorylase Kinase; domain 1 316 427 - -
Gso15g1907 670 Pfam Domain of unknown function (DUF3403) 627 670 IPR021820 GO:0004674
Gso15g1907 670 ProSiteProfiles Protein kinase domain profile. 352 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1907 670 Gene3D Transferase(Phosphotransferase) domain 1 428 629 - -
Gso15g1907 670 CDD STKc_IRAK 358 623 - -
Gso15g1907 670 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 20 668 - -
Gso15g1907 670 SUPERFAMILY Protein kinase-like (PK-like) 337 651 IPR011009 -
Gso15g1907 670 Pfam Protein tyrosine and serine/threonine kinase 356 622 IPR001245 GO:0004672|GO:0006468
Gso15g1907 670 Pfam Salt stress response/antifungal 39 140 IPR002902 -
Gso15g1907 670 Pfam Salt stress response/antifungal 197 252 IPR002902 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso15g1907 Gso-Chr15 42018055 42021579 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1907 10 670 Receptor kinase-like Gene Family AT4G05200 41.014 2.36e-178 522
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso15g1907 PK_Tyr_Ser-Thr 1.3e-46 CL0016