Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1902 ATGGATAGAGTAATATATTCCTTTATGTTCGTGTTAATATTGCTAAGCTCCAAATCAGTTGTTACTACAAAGGCACAACCACCCATTTATTTGGCAGATGACTGCGATTTCAACCCCCAAAAACCTCTCGGCGGTGAATACCAAACCAACCTTAACAGTATTCTCTCATGGCTATCCTCAGATGCAGCCACAAGCAAAGGTTATAATCACAAAAGCATTGGCAAAAACAACAGTGCTGTGTATGGCCTCTATGATTGCCGTGGTGATGTGGTTGGATACTTTTGTCAATTCTGTGTCTCTACTGCTTCCAGACAAATGCTTCAGCGCTGCCCCAATAGAGTCTCTGCTATCATGTATTACAATTTCTGCATTCTGAGGTACTCTAATGAGAACTTCTTTGGGAATGTTACTATATACCCTCCACGGCATGTAGTTGGAACCAAAAACGTGTCTAGTGAAGAAGAGATTCAGAAAGGTGAGCATTTTATGAGGAGTTTAATCAGAAAAGCAACTGTGGAAACCGACCAGTTGTATTATATGGATGGCTTCAATTTGAGTTCCACTCAGAAAAGGTATGGCTTGGTGCAGTGCAGCAGAGATCTCACCAATGAAGGGTGCAGACAGTGTTTAGAGGCCATGCTAGCACAGGTTCCCAAATGTTGTGAACATAAGTTGGGGTGGCTCGTTGGTACTGCAAGTTGTCACATAAAGTATGATGATTATATGTTCTATCTTTTTAACAACCAATCATATCTTGTCCATAAGATAACAGCTAAACAAGGGCATTTGAGCAAGTCAAGAAACTTGATCTTTGGATTAAGTGCGTTGGGGATGGTAGCCCTACTGTGTTTGAGTGTCTATTGCTTGTGTTGCCGGAATAGAGTTAGAGAAGACGGGCTGCTACCTGATACTGTTCCTCTATCTGCATATACAAACTTGCCTACAATCCAATTAATCACAATTCTGGAGACTACTAATAACTTTTCTGAAGCATCAAAATTAGGCGAAGGTGGATTTGGCCCAGTTTACAAGGGAATTCTACCAGATGGAAGACAAGTTGCGGTCAAAAGGCTCTCAAGAGCTTCTAATCAAGGCTCAGAGGAGTTTAAGAATGAAGTAACATTTATAGCCAAATTGCAACATTGCAACCTTGTAAGACTTTTGGCATGCTGCTTGGACGAAAATGAAAAGATTCTTGTATATGAGTATTTGTCGAATGCAAGTCTCGACTTTCACCTATTTGATGATGAGAAAAGGAAGCAACTCGATTGGAAACTTAGGTTAAGCATGATCAACGGAATAGCAAGAGGTCTTTTATATCTTCACGAGGGCTCTCGACTCAAGGTAATCCATAGAGATCTCAAAGCTAGCAATGTTCTATTAGACGATGAGATGAATCCCAAAATATCAGATTTTGGATTGGCTAGAGCATTTGAAAATGGCCAGAACCAGGCAAACACAAATCGAATAATGGGCACTTACTTTGGAGTTCTTGTCCTAGAGATCATTTGTGGAAAGAGGAACAGTGGATTTTTTCTATCAGAACATGGTCAAACTCTTCTTTTATATACTTGGAGAGTGTGGTGCTCAGGAAAATGTTTGGAATTAATGGATCCAGTGCTAGAAAATTCCTACATAGCCAATGAAGTTGTGAAGTGCATACAGATTGGTTTACTGTGTGTTCAAGAAGCTGCAGCAAATAGACCAACCATGTCCAATGTTGTTGTATTTTTGGCAAGCGATGGAATGGCCCTTCCAAACCCTAACAAACCTGCATTCTCGGTTGGAAGAAGGACTTCAGACGAAACATCTAGTTCAAGAAATTCCAAAAATATTTCCATTAATGATGCATCAATCTCTAGTATTGTACCAAGGTAA 1878 0.4015 MDRVIYSFMFVLILLSSKSVVTTKAQPPIYLADDCDFNPQKPLGGEYQTNLNSILSWLSSDAATSKGYNHKSIGKNNSAVYGLYDCRGDVVGYFCQFCVSTASRQMLQRCPNRVSAIMYYNFCILRYSNENFFGNVTIYPPRHVVGTKNVSSEEEIQKGEHFMRSLIRKATVETDQLYYMDGFNLSSTQKRYGLVQCSRDLTNEGCRQCLEAMLAQVPKCCEHKLGWLVGTASCHIKYDDYMFYLFNNQSYLVHKITAKQGHLSKSRNLIFGLSALGMVALLCLSVYCLCCRNRVREDGLLPDTVPLSAYTNLPTIQLITILETTNNFSEASKLGEGGFGPVYKGILPDGRQVAVKRLSRASNQGSEEFKNEVTFIAKLQHCNLVRLLACCLDENEKILVYEYLSNASLDFHLFDDEKRKQLDWKLRLSMINGIARGLLYLHEGSRLKVIHRDLKASNVLLDDEMNPKISDFGLARAFENGQNQANTNRIMGTYFGVLVLEIICGKRNSGFFLSEHGQTLLLYTWRVWCSGKCLELMDPVLENSYIANEVVKCIQIGLLCVQEAAANRPTMSNVVVFLASDGMALPNPNKPAFSVGRRTSDETSSSRNSKNISINDASISSIVPR* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1902 625 MobiDBLite consensus disorder prediction 589 611 - -
Gso15g1902 625 ProSiteProfiles Gnk2-homologous domain profile. 29 132 IPR002902 -
Gso15g1902 625 ProSiteProfiles Gnk2-homologous domain profile. 138 243 IPR002902 -
Gso15g1902 625 Gene3D - 142 243 IPR038408 -
Gso15g1902 625 Gene3D - 35 132 IPR038408 -
Gso15g1902 625 Gene3D Phosphorylase Kinase; domain 1 303 403 - -
Gso15g1902 625 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 17 494 - -
Gso15g1902 625 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 495 622 - -
Gso15g1902 625 Pfam Salt stress response/antifungal 161 241 IPR002902 -
Gso15g1902 625 Pfam Salt stress response/antifungal 43 129 IPR002902 -
Gso15g1902 625 Gene3D Transferase(Phosphotransferase) domain 1 495 584 - -
Gso15g1902 625 Gene3D Transferase(Phosphotransferase) domain 1 404 494 - -
Gso15g1902 625 MobiDBLite consensus disorder prediction 593 611 - -
Gso15g1902 625 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 494 - -
Gso15g1902 625 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 495 622 - -
Gso15g1902 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Gso15g1902 625 ProSiteProfiles Protein kinase domain profile. 328 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1902 625 Pfam Protein kinase domain 329 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1902 625 SMART serkin_6 328 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1902 625 Pfam Domain of unknown function (DUF3403) 580 625 IPR021820 GO:0004674
Gso15g1902 625 SUPERFAMILY Protein kinase-like (PK-like) 312 608 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1902 Gso-Chr15 41841430 41847473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1902 20 625 Receptor kinase-like Gene Family AT4G05200 39.091 3.40e-152 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso15g1902 Pkinase 8.5e-34 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1902 15 41841430 41847473 Gso11g2222 11 37922018 37926874 GST