LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso15g1891	ATGGAGTGCCTTCAGCAATTCCTTCATTTTCTCTTTGTAGCTTCTCTACTCATCAGCAGTACAGCAATTTCAGATCAAATTCCCAAGCCTTATGTTGTTTATATGGGAAATTCATCACCAAATAACATTGGAGTAGAGGGCCAAATACTAGAATCATCACATCTGCATTTATTGTCATCAATTATTCCAAGTGAACAAAGTGAGAGGATTGCTCTAACCCACCATTTTAGTCATGCCTTCAGTGGCTTCTCTGCCTTGCTTACAGAGGGTGAAGCTTCTGCACTGTCTGGTCACGATAGTGTGGTGTCTGTGTTCCCTGATCCAGTGCTTCAGTTACACACAACGCGATCTTGGGATTTCTTGGAATCAGATTTGGGAATGAAGCCTTATAGTTATGGCACTCCCAAATTACACCAACACTCATCAAGTGATATCATTATTGGTGTCATAGACACAGGGATATGGCCAGAGTCTCCAAGTTTCAGGGATGAGGGTATAGGGGAGATTCCTTCAAGATGGAAAGGTGTTTGCATGGAGGGTAGTGATTTCAAGAAATCCAATTGCAATAGAAAATTGATAGGTGCAAGATACTATAATATTCTGGCTACATCAGGTGACAACCAGACTCATATAGAAGCAACCAAAGGTTCCCCAAGAGATTCTGTTGGACATGGGACTCACACAGCATCAATAGCAGCTGGTGTTCATGTCAACAATGCTAGTTATTTTGGTTTAGCACAAGGAACAGCAAGAGGTGGTTCACCTTCTACTAGGATTGCTGCTTATAAAACATGCTCAGATGAAGGATGCTCTGGTGCCACCATACTAAAGGCTATTGATGATGCTGTGAAGGATGGAGTAGATATAATCTCAATCTCTATTGGACTCAGCTCACTATTCCAATCAGACTTTTTAAGTGATCCTATAGCCATTGGAGCATTTCATGCAGAACAAAAGGGGGTCCTGGTGGTGTGTTCAGCTGGCAATGATGGTCCTGATCCTTTCACAGTTGTGAACACTGCACCGTGGATATTTACTATTGCAGCTTCTAATATTGATAGGAACTTCCAATCAACTATTGTCCTTGGAAATGGGAAATATTTCCAAGGTACTGGCATTAACTTTTCAAACCTTACTCATTCAAAGATGCATCGCCTTGTCTTTGGAGAGCAAGTAGCTGCCAAATTTGTCCCTGCATCAGAAGCTAGGAACTGTTTTCCTGGATCACTAGATTTCAACAAAACTGCAGGCAGCATTGTTGTTTGTGTTAATGATGATCCAACTGTTTCGAGGCAAATCAAGAAGCTAGTTGTACAAGATGCAAGAGCCATAGGGATAATACTCATTAATGAGGACAACAAAGATGCTCCCTTTGATGCAGGTGCATTTCCCTTCACTCAGGTTGGCAATCTTGAAGGCCATCAAATCCTACAATACATAAACTCTACCAAGAACCCAACTGCAACAATTCTTCCAACAACAGAAGTTTCTAGATTAAAGCCTTCACCAATTGTTGCATCTTTCTCATCCAGAGGTCCTTCCAGCCTTACAGAAAACGTTCTTAAGCCTGATGTGATGGCTCCAGGCGTTGGCATTTTGGCCGCTGTGATTCCCAAAAGTAAAGAACCAGGAAGTGTCCCAATTGGGAAAAAGCCATCCTTGTATGCCATAAAATCTGGTACATCTATGGCTTGCCCACATGTGACAGGTGCAGCTGCATTCATTAAGTCAGTACACACAAAATGGAGTTCTTCAATGATCAAATCAGCATTGATGACAACAGCTACAAACTACAACAACTTGAGGAAGCCTCTTACTAACAGCTCAAACTCCATTGCCGATCCACATGAAATGGGAGTTGGGGAAATTAATCCACTCAGAGCTCTCAACCCTGGCTTAGTCTTTGAAACAGATGTGGAAGACTATCTCAGATTCCTTTGTTATTTTGGCTATTCACAGAAAATCATAAGGTCAATGTCTAAGACAAACGTCAATTGCCCAAAGAACTCTTCTGAAGGCCTTATCTCCAACGTCAATTACCCATCAATATCTGTAAGTACACTTAAAAAGCAACAAAAAGCAAAAGTGATCACAAGAAAAGTTACCAATGTTGGATCCCTTAATGCCACATACACTGCAAAAGTGCTTGCACCTGAGGGATTGGTTGTGAAGGTCATCCCCAATAAACTTGTGTTTTCTGAGGGTGTTCAAAGAATGACCTATAAAGTCTCATTCTATGGCAAGGAGGCCCGTAGTGGATACAATTTTGGGTCTCTAACATGGCTTGATGGTCACCATTATGTTCATACAGTATTTGCAGTCAAAGTTGAATAA	2334	0.4143	MECLQQFLHFLFVASLLISSTAISDQIPKPYVVYMGNSSPNNIGVEGQILESSHLHLLSSIIPSEQSERIALTHHFSHAFSGFSALLTEGEASALSGHDSVVSVFPDPVLQLHTTRSWDFLESDLGMKPYSYGTPKLHQHSSSDIIIGVIDTGIWPESPSFRDEGIGEIPSRWKGVCMEGSDFKKSNCNRKLIGARYYNILATSGDNQTHIEATKGSPRDSVGHGTHTASIAAGVHVNNASYFGLAQGTARGGSPSTRIAAYKTCSDEGCSGATILKAIDDAVKDGVDIISISIGLSSLFQSDFLSDPIAIGAFHAEQKGVLVVCSAGNDGPDPFTVVNTAPWIFTIAASNIDRNFQSTIVLGNGKYFQGTGINFSNLTHSKMHRLVFGEQVAAKFVPASEARNCFPGSLDFNKTAGSIVVCVNDDPTVSRQIKKLVVQDARAIGIILINEDNKDAPFDAGAFPFTQVGNLEGHQILQYINSTKNPTATILPTTEVSRLKPSPIVASFSSRGPSSLTENVLKPDVMAPGVGILAAVIPKSKEPGSVPIGKKPSLYAIKSGTSMACPHVTGAAAFIKSVHTKWSSSMIKSALMTTATNYNNLRKPLTNSSNSIADPHEMGVGEINPLRALNPGLVFETDVEDYLRFLCYFGYSQKIIRSMSKTNVNCPKNSSEGLISNVNYPSISVSTLKKQQKAKVITRKVTNVGSLNATYTAKVLAPEGLVVKVIPNKLVFSEGVQRMTYKVSFYGKEARSGYNFGSLTWLDGHHYVHTVFAVKVE*	778

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso15g1891	777	Gene3D	Peptidase S8/S53 domain	144	642	IPR036852	GO:0004252\|GO:0006508
	Gso15g1891	777	PRINTS	Subtilisin serine protease family (S8) signature	142	161	IPR015500	-
	Gso15g1891	777	PRINTS	Subtilisin serine protease family (S8) signature	220	233	IPR015500	-
	Gso15g1891	777	PRINTS	Subtilisin serine protease family (S8) signature	559	575	IPR015500	-
	Gso15g1891	777	Pfam	Peptidase inhibitor I9	31	113	IPR010259	-
	Gso15g1891	777	Gene3D	-	646	776	-	-
	Gso15g1891	777	SUPERFAMILY	Subtilisin-like	132	630	IPR036852	GO:0004252\|GO:0006508
	Gso15g1891	777	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	18	113	IPR037045	-
	Gso15g1891	777	ProSiteProfiles	Serine proteases, subtilase domain profile.	117	629	-	-
	Gso15g1891	777	ProSitePatterns	Serine proteases, subtilase family, serine active site.	560	570	IPR023828	-
	Gso15g1891	777	CDD	Peptidases_S8_3	110	596	IPR034197	-
	Gso15g1891	777	PANTHER	CO(2)-RESPONSE SECRETED PROTEASE	67	773	-	-
	Gso15g1891	777	Gene3D	-	353	497	-	-
	Gso15g1891	777	Pfam	Subtilase family	142	600	IPR000209	GO:0006508\|GO:0008236
	Gso15g1891	777	Pfam	Fibronectin type-III domain	677	774	IPR041469	-
	Gso15g1891	777	CDD	PA_subtilisin_like	359	490	-	-
	Gso15g1891	777	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	67	773	IPR045051	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso15g1891	Gso-Chr15	41164660	41176858	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso15g1891	31	774	Subtilisin-like Serine Gene Family	AT1G20150	42.651	0.0	590

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso15g1891	15	41164660	41176858	Gso11g2209	11	37730619	37743145	GST