Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1888 ATGGAAGAGGAAAATGTTAAGCAGCCATTGTTGGAGAGGAAGTACCACGAGAACTGCCCTGGTTGCAAAGTGGATCAAGCCAAAGAGTTGAGTGAGGGAAAGGGTGTACCCGTTACAAATCTTTTCATCATATGGATGGTGGTGTTGTGTGCTGCGCTGCCTATATCGTCTCTCTTTCCATTCCTTTATTTCATGGTAAGGGATTTTAATATTGCGAAAACAGAAGCTGACATTAGTTCTTATGCTGGTTATGTTGGTTCTGCATTCATGTTTGGCAGATGTTTGACATCTGTATTATGGGGTATTATAGCTGATCGCTACGGTCGAAAGCCTGTTATAGTTATAGGGATTATTGTAGTTGTCATTTTCAACACACTATTTGGCCTTAGCACAAGTTTTTGGATGGCAGTTATCATGAGATTTCTTCTGGGAAGTTTAAATGGTTTGCTTGGACCAGTGAAGGCCTATGCCACTGAACTTTTTCGGGAAGAACACCAAGCTCTAGGACTCTCAACTGTCAGTGCAGCTTGGGGCATAGGTTTAATCATTGGCCCAGCATTGGGAGGCTATTTAGCTCAGCCCGTAGAGAAGTACCCACATATATTTCCAAAGGATTCCTTCTGGGATAAGTTTCCTTACTTCTTGCCCAACTTTATAATATCTGCAGTTGCATTTGTAGTAGTTATTGGCTGTATCTGGATTCCGGAAACACTTCACAACCACAAATGTAGAAATGAATCCATAGACAATGCTGAAACTTTAAAAAATGGAGGCAATGTGGCTGGTAAAGACAAGATAATCCAAAAGAAGGAAAACCTCCTCCTGAATTGGCCCTTAATGTCATCGGTCATTGTTTATTGTGTTTTCGCACTTCATGATATTGCGTATCAAGAGGTTTTCTCGATATGGGCTGTGAGTCCTCAAAGGCTGGGGGGGTTGAACTTTACAACTGATGATGTTGGTAATGTTCTTTCAATATCAGGTCTTGCGCTTATCATTTACCAACTTATCATATACCCATATGTGGAAAAAGCTAGTGGACCTATTGTTATTGGTCGCATCTCCGGGATGATATCCATACCACTTTTGCAAAGTTACCCCTTCATAGCATTGTTGTCTGGCTTAGCACTATACATAGTGTTAAGTGTTGCTTCAATTCTGAAGAATCTTCTGTCTGTAACCATTAATACTGGTCTGTTCCTTCTACAAAACCGAGCAGTGGAACAACACCAGAGGGGGGCAGCTAATGGCATTTCCATGACAGGCATGTCTCTATTCAAATCTATTGGCCCTGCTACAGGTGGTGCAATATTAACTTGGTCACAAAAGCGGATGGATGCTTCATTCCTCCCAGGCACCCATATGGTCTTCTTTGTCTTGAACATAGTTGAAGGACTTGGAATACTAATGTTGTTCAAACCATTCCTTGTTGAAAAGAAGAAAACGCACTCCAATCAGTTACATTGA 1467 0.4138 MEEENVKQPLLERKYHENCPGCKVDQAKELSEGKGVPVTNLFIIWMVVLCAALPISSLFPFLYFMVRDFNIAKTEADISSYAGYVGSAFMFGRCLTSVLWGIIADRYGRKPVIVIGIIVVVIFNTLFGLSTSFWMAVIMRFLLGSLNGLLGPVKAYATELFREEHQALGLSTVSAAWGIGLIIGPALGGYLAQPVEKYPHIFPKDSFWDKFPYFLPNFIISAVAFVVVIGCIWIPETLHNHKCRNESIDNAETLKNGGNVAGKDKIIQKKENLLLNWPLMSSVIVYCVFALHDIAYQEVFSIWAVSPQRLGGLNFTTDDVGNVLSISGLALIIYQLIIYPYVEKASGPIVIGRISGMISIPLLQSYPFIALLSGLALYIVLSVASILKNLLSVTINTGLFLLQNRAVEQHQRGAANGISMTGMSLFKSIGPATGGAILTWSQKRMDASFLPGTHMVFFVLNIVEGLGILMLFKPFLVEKKKTHSNQLH* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1888 488 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 1 486 - -
Gso15g1888 488 PANTHER MAJOR FACILITATOR SUPERFAMILY-RELATED 1 486 - -
Gso15g1888 488 Pfam Major Facilitator Superfamily 44 380 IPR011701 GO:0022857|GO:0055085
Gso15g1888 488 ProSiteProfiles Major facilitator superfamily (MFS) profile. 40 479 IPR020846 GO:0022857
Gso15g1888 488 CDD MFS_SLC46_TetA_like 44 473 - -
Gso15g1888 488 Gene3D MFS general substrate transporter like domains 39 464 IPR036259 -
Gso15g1888 488 PRINTS Tetracycline resistance protein signature 113 137 IPR001958 GO:0022857
Gso15g1888 488 PRINTS Tetracycline resistance protein signature 170 192 IPR001958 GO:0022857
Gso15g1888 488 PRINTS Tetracycline resistance protein signature 344 364 IPR001958 GO:0022857
Gso15g1888 488 SUPERFAMILY MFS general substrate transporter 40 481 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1888 Gso-Chr15 41117306 41126516 Dispersed/Wgd