Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1879 ATGGACATCGAATTTGAGGATAGACAAGAAGAAACAGTTTCAGATATGATACCAAGCAATCAGCATAGGAAAAAACAGTCGTTTCTATGGAAAGTTTTGGCCATGAGAGAAAGAAATGGAAGGACAATGGAGAGAGGCTCAAATGCTTCCCTTGATCCACTTTCTGATTCATCCTTTGACAATCGAGGCTCAGAACCTTCTATGTCTTCTAGTGAAGCAATTCAAAATTTCAGAGTTTTTGCAGCAACATGGAATGTAGGAGGGCAATGCCCCACTGGAAACCTTGATCTGAATGATTTTCTTCAAGTTCGAAACGAACCAGATATGTATGTTTTGGGCTTTCAGGAAATTGTCCCTTTAAATGCTGGAAATGTGCTGGTATTAGAGGATAATGAGCCTGCTGCAAAATGGCTTGCTTTAATCAACCAATCACTCAATGGTTCTTCAGATTTGGCTTCTAAGGGACTAAAACTGACTGCATCTTTTGGAGGCCCATTGTTCTCGCAAAAGCCTTCTTTGAAGAAGATTAAGAAAACTTTCAAGAAACTAAATGGAAAGAGGCTAAAAAGTTGTAACTGTGTTCTTGAAATGGAAAGGAAGGCTGCTAAGGATTTCTGTTTTCGCTGCCAAGAATCAAACTTCAATTCAGATGATTCTTCCACAGAAGAGGAGGATGAGAATTTCACAATTCCTGTTGCATTGGCAACTAGTCAGATGAAATACAGTCTTGTTGCATGTAAGCAAATGGTTGGAATTTTTGTAAGTGTCTGGATGAGGAGGGAACTTGTTCAGTATGTAGGCCATTTGAGAATATGCTGTACTAGCCGCGGGATCATGGGTTGCCTTGGGAACAAGGGGTGTATATCAGTGAGCATGTCATTTTATCAGACAAGTTTTTGCTTTATCTGTAGTCATTTGGCATCTGGAGAGAAAGAGGGTGACGAGCTTCGTAGAAACCTTGATGTCATAGAGATTCTGAAGAACACTCAATTCCCAAGGATTTGCAAGACACCACATAGTAGGATGCCTGACAAAATTTTAGATCACGACCGAATCATATGGTTTGGGGACTTGAATTACAGAATTTCTTTGAGCCATGATGATGCAAAAAGGCTTGTGGAAAAGAGGGACTGGCCAGCTCTTTTTAACAAGGATCAGCTTAAAATGGAAAGGGAAGCAGGTCGTGTATTCAAGGGGTGGAAAGAGGGAAAGATCTACTTTGCACCTACTTATAAATATGCCTTCAACTCAGACACTTACTATGTTGAAGGTGTAAAAGTTTCAAAGAACAAAAGGAGAACTCCAGCTTGGTGCGATAGAATCTTGTGGCATGGAAGGGGAATACAACAACTTTTGTACGTCCGTAGAGAATTTAAGTTCTCTGACCATCGACCTGTTTGTGCAACATTTAATGTAGAAGTTGAGGTTATGTTCAGGGGACAGAAGAAGAAAGTTTCAACTTGCAACTTTCAGAACATTGATGATCTTGTATCCACAAGAAGTCCATATTTTTCTTGA 1518 0.3999 MDIEFEDRQEETVSDMIPSNQHRKKQSFLWKVLAMRERNGRTMERGSNASLDPLSDSSFDNRGSEPSMSSSEAIQNFRVFAATWNVGGQCPTGNLDLNDFLQVRNEPDMYVLGFQEIVPLNAGNVLVLEDNEPAAKWLALINQSLNGSSDLASKGLKLTASFGGPLFSQKPSLKKIKKTFKKLNGKRLKSCNCVLEMERKAAKDFCFRCQESNFNSDDSSTEEEDENFTIPVALATSQMKYSLVACKQMVGIFVSVWMRRELVQYVGHLRICCTSRGIMGCLGNKGCISVSMSFYQTSFCFICSHLASGEKEGDELRRNLDVIEILKNTQFPRICKTPHSRMPDKILDHDRIIWFGDLNYRISLSHDDAKRLVEKRDWPALFNKDQLKMEREAGRVFKGWKEGKIYFAPTYKYAFNSDTYYVEGVKVSKNKRRTPAWCDRILWHGRGIQQLLYVRREFKFSDHRPVCATFNVEVEVMFRGQKKKVSTCNFQNIDDLVSTRSPYFS* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1879 505 SMART i5p_5 75 478 IPR000300 GO:0016791|GO:0046856
Gso15g1879 505 MobiDBLite consensus disorder prediction 1 20 - -
Gso15g1879 505 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 10 69 486 - -
Gso15g1879 505 Pfam Endonuclease/Exonuclease/phosphatase family 82 463 IPR005135 GO:0003824
Gso15g1879 505 SUPERFAMILY DNase I-like 71 494 IPR036691 -
Gso15g1879 505 Gene3D Endonuclease/exonuclease/phosphatase 59 502 IPR036691 -
Gso15g1879 505 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 69 486 IPR045849 GO:0004445|GO:0046855
Gso15g1879 505 MobiDBLite consensus disorder prediction 44 69 - -
Gso15g1879 505 MobiDBLite consensus disorder prediction 41 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1879 Gso-Chr15 40823483 40829422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1879 241 484 Acyl Lipid Metabolism Gene Families AT2G43900 28.269 6.43e-30 122
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1879 15 40823483 40829422 Gso11g2199 11 37613723 37619939 GST