Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1878 ATGTCGGCTTCCACGGTGTCCATCACGGCAGCAAACCCGGGGGCGCGTCGGAGACCGGTGATCGCCATCGAGAAGAAAACCGCCACCAACCTCGAACTCCTCGCCAACGATGTCGCCGTCTCCCCGGCCGTCGCAACTTCCGGAGACGGCGCCACCGGGCGCGACCTCAGCCACCACTCGGTCCGCGGCGAGGCGCTCCTCGACCGGACGCCCCGTGATTTGGCTCCGGCGAAGAAGGTCGCCGGCGGGAACTCGTCGTCGGTCCCTCCGCGGCGTGCGCGGAAGCTCGCCGCGAAGGCCGAGAAGCCGCGGTGGCTCACGTTGGTGAGCATTTTCGGGAAGAATATGGTGCTCTTGGTAGTGCTGGCGGGGCTGGTCCAGTTGATCTGGCGGATGTCGTTGAAATCCGGCGATGGCATGGCTGGCGGGTATGTCGGGTTTTCGGAATTCGAGGGCCGGATTTCGGATGTGGAGGGGCTGTTGAAGAAGACAGCAAGGATGATTCAGGTTCAAGTTGATGTGGTGGATAAGAAGATTGAGGATGAGGTTAGAGGGTTAAGGAGGGAACTAAATGAGAAAATTGAAGAGAAAGGGGAAATTTTGGAAAATGGGTTGAAGAAAATGGAGGCAAAGAATGAGGAATTGGAGAGGTATTTGAGTGAGTTGAAGGGGGAGGATTGGTTATCAAAAGAGGAGTTTGAGAAGTTTGTTGATGAAGTGAGGAGTGTGAAGGGGAGTGGGTATGAGGGTGGTGGGTTGGATGAGATAAGGGAGTTTGCAAGACGGGTGATTGTGAAAGAGATTGAGAAGCATGCTGCTGATGGGCTTGGGAGAGTGGATTATGCTCTTGCCAGTAGCGGTGGCGCAGTGGTGAAGCATTCGGAGGTGTTTGATTTGGTGAGGGGCAATTGGTTCTTGAAGTCTGCTAGAAATGGTGTCCACCCCAACGCGGAGAAGATGTTGAAACCGAGCTTTGGTGAGCCTGGGCAGTGTTTCCCCTTGAAGGATAGTAGAGGGTTTGTGCAGATTAGGCTCCGCACTGCCATCATTCCTGAGGCTGTCACCTTGGAACATGTAGCGAAGAGTGTTGCATATGATAGATCAAGTGCTCCTAAAGACTGCAGGGTCTCTGGTTGGCTGCAGGAGCATAATGCTGATTCTGCAATTAATACTGAAAAGATGCATCTTCTGGCAGAATTTACATATGACCTTGAGAAGAGCAATGCTCAAACATTCAACGTGTTGAATTCAGCAGCTTCTGGTGTCATCAACACGGTAAGGCTTGATTTTACATCCAACCATGGAAGCCCTTCACACACATGTATATATCGCTTTAGAGTTCACGGTCATGAGCCTGACTCGGTTTCTATGTTGGCACTGGAGTTATAA 1389 0.5263 MSASTVSITAANPGARRRPVIAIEKKTATNLELLANDVAVSPAVATSGDGATGRDLSHHSVRGEALLDRTPRDLAPAKKVAGGNSSSVPPRRARKLAAKAEKPRWLTLVSIFGKNMVLLVVLAGLVQLIWRMSLKSGDGMAGGYVGFSEFEGRISDVEGLLKKTARMIQVQVDVVDKKIEDEVRGLRRELNEKIEEKGEILENGLKKMEAKNEELERYLSELKGEDWLSKEEFEKFVDEVRSVKGSGYEGGGLDEIREFARRVIVKEIEKHAADGLGRVDYALASSGGAVVKHSEVFDLVRGNWFLKSARNGVHPNAEKMLKPSFGEPGQCFPLKDSRGFVQIRLRTAIIPEAVTLEHVAKSVAYDRSSAPKDCRVSGWLQEHNADSAINTEKMHLLAEFTYDLEKSNAQTFNVLNSAASGVINTVRLDFTSNHGSPSHTCIYRFRVHGHEPDSVSMLALEL* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1878 462 ProSiteProfiles SUN domain profile. 276 452 IPR012919 -
Gso15g1878 462 MobiDBLite consensus disorder prediction 55 75 - -
Gso15g1878 462 PANTHER SAD1/UNC-84-LIKE PROTEIN-RELATED 9 457 IPR045119 GO:0005639
Gso15g1878 462 MobiDBLite consensus disorder prediction 46 96 - -
Gso15g1878 462 Gene3D - 257 451 - -
Gso15g1878 462 Pfam Sad1 / UNC-like C-terminal 316 450 IPR012919 -
Gso15g1878 462 PANTHER SUN DOMAIN-CONTAINING PROTEIN 1-LIKE 9 457 - -
Gso15g1878 462 Coils Coil 176 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1878 Gso-Chr15 40804469 40809076 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1878 15 40804469 40809076 Gso11g2198 11 37597458 37601919 GST