Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1829 ATGGGTGTGGTGGTGATCGACGGCAGCACCGTGCGCGACTTCGTGAACGACGAGGCGGCCTTCGCGAAGAGCGTGGACGAGCAGTTCGGGGTGCTGGACCTCAACAACGACGGCGTCCTCTCGCGCTCGGAGCTCCGCACGGCCTTCGAGTCCATGCGCCTCATCGAGACGCACTTCGGCATCGACGTCGCCACGCCGCCGGATCAGCTCGCGAAGCTCTACGACTCCATCTTCGACAAGTTCGACGGCGACCGGAGCGGCGCCGTCGACCGCCGCGAGTTCCGGGATGAGATGAGGAAGATCATGCTCGCCATCGCCGACGGCCTCGGCTCCTTCCCCATCCGCATGGTCCTCGAGGATGATCCCAATAGTCTTCTTCAGAAAGCTGCAGATCTCGAAGCTTCCAAGACCTGA 414 0.6329 MGVVVIDGSTVRDFVNDEAAFAKSVDEQFGVLDLNNDGVLSRSELRTAFESMRLIETHFGIDVATPPDQLAKLYDSIFDKFDGDRSGAVDRREFRDEMRKIMLAIADGLGSFPIRMVLEDDPNSLLQKAADLEASKT* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1829 137 Gene3D - 8 106 - -
Gso15g1829 137 SUPERFAMILY EF-hand 24 100 IPR011992 -
Gso15g1829 137 Pfam EF hand 27 47 IPR002048 GO:0005509
Gso15g1829 137 Pfam EF hand 75 95 IPR002048 GO:0005509
Gso15g1829 137 SMART efh_1 24 52 IPR002048 GO:0005509
Gso15g1829 137 SMART efh_1 73 101 IPR002048 GO:0005509
Gso15g1829 137 ProSitePatterns EF-hand calcium-binding domain. 82 94 IPR018247 -
Gso15g1829 137 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN 1 136 - -
Gso15g1829 137 ProSiteProfiles EF-hand calcium-binding domain profile. 69 104 IPR002048 GO:0005509
Gso15g1829 137 ProSiteProfiles EF-hand calcium-binding domain profile. 20 55 IPR002048 GO:0005509
Gso15g1829 137 ProSitePatterns EF-hand calcium-binding domain. 33 45 IPR018247 -
Gso15g1829 137 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1829 Gso-Chr15 37391328 37392269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1829 1 136 EF-hand Containing Proteins AT2G44310 73.529 2.33e-69 203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1829 15 37391328 37392269 Gso8g1931 8 19216319 19217192 GST