Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1823 ATGTGCGGCTCCAAGACCAAGGTGACTGTAGGCATAGAAGCCACAGCTACCTCTCTGGTGGCCAGAATCAATGGCCGGCCAGTCCTTCAACCGACTTGTAACCGAGTTCCTAACCTGGAGAGGAGAAATTCAATCAAGAAACTGTCACCAAAATCACGTTCTCCTCCATCACCACCACTTCTTAGCAAGACCTCATTGACACCTCCAGTTTCTCCAAAGTCCAAGTCCCCTAGGCCTCCACCTATAAAGCGAGGCAATGAGAGTAATGGACTTAACTCAAGTTCTGAAAAGATTGTGACCCCAAGAAACACCATAAAAACTCCAACTCTAGAGAGGAAAAAGTCCAAGAGTTTCAAGGAAGGGTCATGTGGTGCTTTAGGCCTTTCTGCCTCCACAGAGGCTTCATTAAGTTACTCCTCCACTTTGATCACTGAATCCCCAGGGAGCATAGCTGCAGTGAGGAGAGAACAGATGGCACTGCAGCATGCACAGAGAAAAATGAAGATTGCCCATTATGGAAGATCAAAGTCTGCAAAGTTTGCAAGAGTTATTCCTCTTGAACCTTCAACCAATCTTACTTCAAAGACAAGTGAGGAAAAGAGATGCAGCTTTATCACAGCCAATTCAGATCCCATCTATATTGCTTATCATGATGAAGAATGGGGAGTTCCAGTTCATGATGACAAGATGTTGTTTGAACTTCTAGTTCTAAGTGGTGCTCAGGTTGGATCAGATTGGACCTCAATCTTGAAGAAACGCCAGGATTTCAGGACTGCATTTTCAGAATTTGATGCAGCAACTTTGGCCAACTTGACTGATAAGCAAATGGTGTCTATTAGTATGGAATATGACATTGATATAAGCAGAGTTCGAGGTGTTGTTGACAATGCTAACCGAATTTTAGCGATTAACAAGGACTTTGGTTCATTTGACAAATACATTTGGGATTTTGTCAATCACAAACCCATCTCCACGCAATACAAGTTCGGCCACAAGATCCCAGTGAAGACATCAAAGTCAGAGAGCATAAGCAAAGACATGATCAGAAGGGGCTTTAGGTGTGTAGGTCCAACGGTGCTTCATTCATTTATGCAAGCAGCTGGACTCACCAATGACCACTTAATCACTTGCCATAGACACTTGCAGTGCACCTTATTGGCATCAACCCCCCATTGTACCACAGAGCACTTTCTATAG 1197 0.4394 MCGSKTKVTVGIEATATSLVARINGRPVLQPTCNRVPNLERRNSIKKLSPKSRSPPSPPLLSKTSLTPPVSPKSKSPRPPPIKRGNESNGLNSSSEKIVTPRNTIKTPTLERKKSKSFKEGSCGALGLSASTEASLSYSSTLITESPGSIAAVRREQMALQHAQRKMKIAHYGRSKSAKFARVIPLEPSTNLTSKTSEEKRCSFITANSDPIYIAYHDEEWGVPVHDDKMLFELLVLSGAQVGSDWTSILKKRQDFRTAFSEFDAATLANLTDKQMVSISMEYDIDISRVRGVVDNANRILAINKDFGSFDKYIWDFVNHKPISTQYKFGHKIPVKTSKSESISKDMIRRGFRCVGPTVLHSFMQAAGLTNDHLITCHRHLQCTLLASTPHCTTEHFL* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1823 398 SUPERFAMILY DNA-glycosylase 200 383 IPR011257 GO:0003824|GO:0006281
Gso15g1823 398 MobiDBLite consensus disorder prediction 29 123 - -
Gso15g1823 398 Pfam Methyladenine glycosylase 207 380 IPR005019 GO:0006284|GO:0008725
Gso15g1823 398 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE I 1 398 - -
Gso15g1823 398 MobiDBLite consensus disorder prediction 86 106 - -
Gso15g1823 398 Gene3D Hypothetical protein; domain 2 199 381 - -
Gso15g1823 398 PANTHER OS04G0501200 PROTEIN 1 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1823 Gso-Chr15 36716822 36720414 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1823 15 36716822 36720414 Gso8g1938 8 19356754 19360255 GST
Gso8g1346 8 12794599 12797704 Gso15g1823 15 36716822 36720414 PCT
Gso15g2180 15 50079240 50082389 Gso15g1823 15 36716822 36720414 PCT
Gso15g1823 15 36716822 36720414 Gso8g1346 8 12794599 12797704 PCT
Gso15g1823 15 36716822 36720414 Gso15g2180 15 50079240 50082389 PCT