Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1794 ATGTGCTTACAGCGGCCAGGCATATTTAAATTCGCGGCAGAATTCGAAGGGGGAGCATATAGGTCGTGTGAGAAGCTTGTAATAAGATTTGGAATAACGCTCTTGACGTCTATTAGTTTTTCCATATTCGAAGCTGCAGGCTATGAAGCTTATGGGAACTTTGTTCTTCAACAACTTCACCCCAATGGGACAAACACTTTGTTGTGGCAGAGTTTTGATTATCCCAGCACTTTGATCCCCACCATGAAGCTAGGTGTTAATCACAAAACAGGCCATCAATGGGTACTGGTTTCATCTTTGACTGATTTAGTTTTGAATCCCGGTGCCTTTAGTCTTGAATGGGAACCCAAGGGACAAGAACTGGTCATAAGGAGACGCGGAAAAGTTTGTTGGCGAAGTGGGAAACTGAGAAACAATAGATTTGAGTACATTCCGGAGGAAGCACAACGCATGTTGAAGTATACTATTGTGTCTAATGGGGATGAAGACTCTTTCTCTTTCAACTCTACGAATGACAAGCTTACACCACGGTGGTCTTTTAGTAGAAGTGGGCGGTTATCTTGCAACGAAGGATATGTAAAGGCGGATCTGTGTTATGGATATAACAACACTGGAGGGTGCCAAAGATGGCAAGATTTACCAAAGTGTAGGAATCCTGGCGATTTGTTTGTGAAAAAGACTCTTTTCCCCGATTATGAAAATGTAACTTTTGAAATGAATCCGGCTTTTGGCTACAGTGATTGTGAGGCCAGTTGCTGGAGCAATTGTAGTTGCGATGGATTCAGTGCATTATGGGTTAATGAAACTGGATGTACATTCTATCATTGGAATTCATCGAAAAATTTTGTTGACACTAGTGTTGCTGGTGTAGAGCTTTACATGCTGGAGAACACAGGCAACATAACCCCGCATAACGGTACAAAAAGGTGGATATGGTTAAGTGCAGTAATAGCAACTACTTTACTAATAATATTCCTGTCCATTCTGTGCCTATTGAAGAAACGAAAATATTTGGGTCAAGAGAAGAAACGGAAAGAAATGGTGATGAAGATGCCACATTCTACAATTTGTGATGGGTTATCTTCAATCGAAGATTTTGGAAATGTTTTCAAAAAGGGACACGAGTTAAATGTATTTGATTATACATTAGTTATGATGGCTACAAATGGGTTTTCATCTGAAAATAAGTTAGGACAGGGAGGCTTTGGACCCGTTTACAAGGGAATTCTGCCAACAGGGCAGGAGGTTGCTGTAAAAAGACTTTCAAAAACTTCTACACAAGGAATTATGGAGTTTAAAAATGAACTAACACTTATATGTGAACTTCAGCACATGAATCTCGTACAACTACTTGGTTGTTGCATTCATGAAGAAGAGAAGATTCTAATTTACGAATATATGCCCAACAAAAGCTTGGATTTCTATCTATTCGATAGTAGTAGAAGCAAATTACTAGATTGGAATAAGCGCTTCAACATAATAGAAGGAATTGCTCAAGGATTACTTTATCTTCACAAGTACTCAAGACTCAAAGTCGTTCACAGAGATTTGAAAGCTAGTGTCATACCCTAA 1572 0.3938 MCLQRPGIFKFAAEFEGGAYRSCEKLVIRFGITLLTSISFSIFEAAGYEAYGNFVLQQLHPNGTNTLLWQSFDYPSTLIPTMKLGVNHKTGHQWVLVSSLTDLVLNPGAFSLEWEPKGQELVIRRRGKVCWRSGKLRNNRFEYIPEEAQRMLKYTIVSNGDEDSFSFNSTNDKLTPRWSFSRSGRLSCNEGYVKADLCYGYNNTGGCQRWQDLPKCRNPGDLFVKKTLFPDYENVTFEMNPAFGYSDCEASCWSNCSCDGFSALWVNETGCTFYHWNSSKNFVDTSVAGVELYMLENTGNITPHNGTKRWIWLSAVIATTLLIIFLSILCLLKKRKYLGQEKKRKEMVMKMPHSTICDGLSSIEDFGNVFKKGHELNVFDYTLVMMATNGFSSENKLGQGGFGPVYKGILPTGQEVAVKRLSKTSTQGIMEFKNELTLICELQHMNLVQLLGCCIHEEEKILIYEYMPNKSLDFYLFDSSRSKLLDWNKRFNIIEGIAQGLLYLHKYSRLKVVHRDLKASVIP* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1794 523 SUPERFAMILY Protein kinase-like (PK-like) 373 520 IPR011009 -
Gso15g1794 523 Pfam Protein tyrosine and serine/threonine kinase 394 519 IPR001245 GO:0004672|GO:0006468
Gso15g1794 523 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 51 522 - -
Gso15g1794 523 Gene3D Transferase(Phosphotransferase) domain 1 467 522 - -
Gso15g1794 523 Pfam PAN-like domain 222 275 IPR003609 -
Gso15g1794 523 Pfam D-mannose binding lectin 51 98 IPR001480 -
Gso15g1794 523 SUPERFAMILY alpha-D-mannose-specific plant lectins 51 135 IPR036426 -
Gso15g1794 523 ProSiteProfiles Protein kinase domain profile. 391 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1794 523 Gene3D Phosphorylase Kinase; domain 1 361 466 - -
Gso15g1794 523 SMART tyrkin_6 391 523 IPR020635 GO:0004713|GO:0006468
Gso15g1794 523 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 51 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1794 Gso-Chr15 35130065 35139411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1794 379 522 Receptor kinase-like Gene Family AT4G04570 63.889 1.38e-57 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso15g1794 PK_Tyr_Ser-Thr 5e-24 CL0016