Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1790 ATGGTCAGCTGTAAAACTCAATTCCTGCTAGTTTTTGTATACTTGTGGTTGTGGTGGACTACTTGTAGCCACGTTATTTCTGCAAAGCACAGTTTGAAGCCCGGAGAAAAACTAAATTCCAAAACCAATATTTGTTCAGAAAACGGTATATATTGCATTAGTTTTTCTTCATCAACTGGAGACTGTTACTTGCAAATAGTTAGGAAAAGAGGAGATAGTTGGAGTGTGTGGTTTGCTAATAGAAATGAACCTGTTGACGCGGAATCCGCAGTTCTGTTGCTAGATCACTCTGGTGTACTGAAAATAGAATCAAAACACAGGGAATTACCCATCATTCTTTACTTTTCACCTCAACCAGCCAACAACACTATGGCCACACTCTTAGATACAGGCAACTTTGTGCTGCAACAGCTTCACCCCAATGGAACAAAGAGTGTGCTGTGGCAAAGTTTTGATTATCCTACTGATAATTTGCTCCCCGGGATGAAGTTAGGAGTCAGTTACAAAACTAGTCATAATTGGTCACTAGTTTCATGGCTAACTTCTGAAATCCCAAATCTTGGAGCTTTCAGTCTTGAATGGCAACCCAGAACAAGAGAATTGATCATCAAGCGACGAGAACAATTGTGCTGGACAAGTGGAGAACTGAGAAACAAAGAGGGATTCATGCACAACACACACTACAGGATTGTATCAAACGAAAACGAAAGCTACTTCACAATTACAACTTCAAATGAAGAGCTTACAAGATGGGTGCTATTAGAAACTGGGCAGCTGATAAATCGGAATGGAGGCGATGACGTTGCGAGGGCCGATATGTGTTATGGATACAACACAGATGGAGGGTGCCAAAAGTGGGACGAGATACCCATCTGCAGGCATCGTGGCGATGCATTTGAGGACAGGTTAGGTTACCCCAGTACAAACATGGAAAGCTATCTAGCAAACTCGAGTTATGGCCCAAGTGATTGTCAGGATATTTGCTGGAAAAATTGCAGTTGTATTGCATACAGTGATTATGATGGTAATAATGGAACTGGCTGTACATTCTATCATTGGAATTCAACCAAAGGTACTAATTTAGCAAGTGGCGGCATGAAGTTTCGCTTATTGGTAAAGAACACCGATCACAAAGGTACAAAAAAGTGGATATGGATAACTATTCTAATAGTAGCAACTCTAGTTGTAATCAGCGCTTTCGTTCTGTTTCTGGCCTTGAAGAATAGAAAACTTTTGTTTAAAGAGGAAAGAAGAAAAGGAATGAAGACTAATAAGATGACAGATTTAGCAACTGCAAATAGATTCTATGATGTCAAAGATCTTGAAGATGAGTTCAAGAAGAGACAGGATCTAAAAGTATTAAACTATACATCAGTACTGTCAGCAACCGATGATTTTTCAACTGAAAACAAGTTAGGACAAGGAGGCTTTGGGCCTGTTTATAAGGGAATCCTACCAACTGGGCAAGAAGTTGCCATCAAAAGACTTTCAAAAACATCTACACAAGGAATTGTGGAATTCAAAAATGAACTAATGCTTATATCTGAACTTCAGCACACGAATCTTGTACAGCTACTTGGATTCTGCATTCATGAAGAAGAGAGAATTCTAATTTACGAGTATATGCCAAACAAAAGCTTGGATTTCTATTTGTTCGATTGCACTAGAAGCATGTTACTAGACTGGAAGAAGCGCTTCAACATAATAGAAGGGATGTCTCAAGGAATACTCTATCTTCATAAGTACTCAAGACTAAAAATCATTCACAGAGACTTGAAAGCTAGTAACATACTACTTGATGAGAATATGAACCCAAAAATTTCTGATTTTGGATTGGCAAGAATGTTTATGCAACAAGAGTCCACAGGAACTACTAGTAGGATTGTTGGGACATATGGGTACATGTCTCCTGAATATGCCATGGAAGGATCTTTCTCGACAAAATCTGATGTCTATAGCTTTGGAGTGTTGCTACTTGAAATTGTCAGTGGGAGAAAAAACACTAGTTTCTATGATGTTGACCACCTTTTAAACCTAATTGGACATGCATGGGAATTATGGAATCAAGGTGAGTCTCTACAGTTATTGGACCCATCACTAAATGACTCTTTTGATCCTGATGAAATGAAAAGATGCATCCATGTTGGTCTCTTATGCATAGAACACTATGCAAATGATCGACCTACAATGTCTAATGTCATATCAATGTTAACAAATGAAAGTGCACCAGTTACCTTACCCCGAAGACCAGCATTATATGTGGAAAGAAAAAATTTTGATGGCAAAACATCTTCCAAAGAGTTATGTGTAGACTCTACAGATGAATTTACTGCTTCCACTTATTAA 2346 0.3862 MVSCKTQFLLVFVYLWLWWTTCSHVISAKHSLKPGEKLNSKTNICSENGIYCISFSSSTGDCYLQIVRKRGDSWSVWFANRNEPVDAESAVLLLDHSGVLKIESKHRELPIILYFSPQPANNTMATLLDTGNFVLQQLHPNGTKSVLWQSFDYPTDNLLPGMKLGVSYKTSHNWSLVSWLTSEIPNLGAFSLEWQPRTRELIIKRREQLCWTSGELRNKEGFMHNTHYRIVSNENESYFTITTSNEELTRWVLLETGQLINRNGGDDVARADMCYGYNTDGGCQKWDEIPICRHRGDAFEDRLGYPSTNMESYLANSSYGPSDCQDICWKNCSCIAYSDYDGNNGTGCTFYHWNSTKGTNLASGGMKFRLLVKNTDHKGTKKWIWITILIVATLVVISAFVLFLALKNRKLLFKEERRKGMKTNKMTDLATANRFYDVKDLEDEFKKRQDLKVLNYTSVLSATDDFSTENKLGQGGFGPVYKGILPTGQEVAIKRLSKTSTQGIVEFKNELMLISELQHTNLVQLLGFCIHEEERILIYEYMPNKSLDFYLFDCTRSMLLDWKKRFNIIEGMSQGILYLHKYSRLKIIHRDLKASNILLDENMNPKISDFGLARMFMQQESTGTTSRIVGTYGYMSPEYAMEGSFSTKSDVYSFGVLLLEIVSGRKNTSFYDVDHLLNLIGHAWELWNQGESLQLLDPSLNDSFDPDEMKRCIHVGLLCIEHYANDRPTMSNVISMLTNESAPVTLPRRPALYVERKNFDGKTSSKELCVDSTDEFTASTY* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1790 781 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 766 - -
Gso15g1790 781 SUPERFAMILY Protein kinase-like (PK-like) 452 759 IPR011009 -
Gso15g1790 781 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 181 IPR036426 -
Gso15g1790 781 ProSiteProfiles Bulb-type lectin domain profile. 29 148 IPR001480 -
Gso15g1790 781 CDD STKc_IRAK 472 739 - -
Gso15g1790 781 Gene3D Phosphorylase Kinase; domain 1 427 541 - -
Gso15g1790 781 ProSiteProfiles Protein kinase domain profile. 466 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1790 781 Gene3D Transferase(Phosphotransferase) domain 1 542 745 - -
Gso15g1790 781 SMART serkin_6 466 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1790 781 SMART blect_4 35 154 IPR001480 -
Gso15g1790 781 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
Gso15g1790 781 Pfam D-mannose binding lectin 76 179 IPR001480 -
Gso15g1790 781 Pfam PAN-like domain 305 352 IPR003609 -
Gso15g1790 781 Gene3D - 23 151 IPR036426 -
Gso15g1790 781 Pfam Protein tyrosine and serine/threonine kinase 468 736 IPR001245 GO:0004672|GO:0006468
Gso15g1790 781 PIRSF SRK 263 780 IPR024171 GO:0004674
Gso15g1790 781 PIRSF SRK 2 274 IPR024171 GO:0004674
Gso15g1790 781 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 9 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1790 Gso-Chr15 34765627 34768943 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1790 400 753 Receptor kinase-like Gene Family AT3G45860 51.966 1.36e-123 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso15g1790 PK_Tyr_Ser-Thr 9.4e-49 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1790 15 34765627 34768943 Gso8g1965 8 20108694 20114410 GST