Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1789 ATGGTGTGTTATAAACTGGGGGAATCTCATTTCTTGCTTGTTTTAACATGCTTGTGGTTGTGGTTGTGGTGGAGTACTCGTATCCACGTTATTGCTGCATATCACAGTTTGAGGCCCGGTGATACTCTGAATTCCACAACCGAACTGTGTTCTGAAAACGATAAATATTGCTTGGGTTTTTCCCAATTTAGTTCTGCTCATAACAGCACTTATTTGCGGATATACGCCAAAGGAAAAGGTGACTGGAACATGTGGATTGGTAATAGAAACCAACCACTTGACATGGATTCCGCAGTTCTGTCGCTGAGCCACTCTGGAGTACTGAAAATAGAATCCAAAGACATGGAACCTATCATCCTTTACTCTTCAACGCAGCCGTCGAACAACACTGTGGCAACATTGATGAACACGAGCAATTTTGTGTTGCAACGCCTTCAACCCGGTGGGACTGAGAGTACTGTGTTGTGGCAAAGTTTTGATTATCCTACTGATAAGTTGCTCCCTGGGATGAAGTTAGGAGTCAATCACAAAACTGGTCGCAATTGGTCTCTAGTTTCGTCAATGGGTTATGCTAACCCAGCTCTTGGGGCATTCAGGCTTGAATGGGAACCCAGAAGAAGAGAATTACTCATCAAGCAACGAGGACAATTGTGTTGGACAAGTGGAGAACTCCGAAAAAACATAGGATTCATGCACAACACGCATTACATGATTGTCTCAAACGACGACGAAAGCTACTTCACAATTACAACTTTGAATGAAGAGTTAACAAGATGGGAGCTATTAAAAACTGGGCAGTTGATTAATAGGAATGGAGATGACAATGTTGCAAGGGCTGATATGTGTTATGGGTACAACACAGATGGAGGGTGCCAAAAATGGGAGGACATACCCTTCTGCAGAAATCCTGGTGATGCATTTGAACTCAAAGAAGTTTACCTCAATTTAAACCTGAAAAATTTTCTGGCTAATTCGAGTTATAGCCCGAGTGATTGCCGGGATACTTGCTGGAAAAATTGTAGTTGTGATGGATTCACAGATTATTACGATGATGGAACTGGTTGTATATTCGTGTATTTAAATTTAACAGAAGGTGCTGATTTTGCAAGTGGGGGCGAAAAATTTTACATATTGGTAAAGAACACCCATCACAAAGGTACAAAAAAGTGGATATGGATAAGTATTCTAATAGTAGCTGCTCTATTTTCAATATGTGCTTTCATTCTGTATCTGGCCTTAAAGAAAAGAAAACTTCGGTTTGAAGATAAAAACAGAAAAGAAATGGAAATTAATAAGATGGAAGATTTAGCAACTTCAAATAGATTCTACGATGCCAGAGATCCTGAAGATGAGTTCAAGAAGAGACAAGATCTAAAAGTATTTAGCTACACATCAGTTCTGTTAGCATCCAATGATTTTTCAACTGAAAACAAGTTAGGACAAGGAGGATTTGGACCTGTTTATAAGGGAATCCAACCAAATGGGCAAGAAGTTGCCATAAAAAGACTTTCTAAAACATCTTCACAAGGAACTGCGGAATTCAAAAATGAACTAATGCTTATAGGTGAGCTTCAGCACATGAATCTTGTACAACTACTTGGATACTGCATTCACGGCGAAGAGAGGATTCTAATTTACGAGTATATGCATAACAAAAGCTTGGATTTCTATTTATTTGATGGTACTAGAAGCAAGCTACTAGACTGGAAGAAGCGTTTCAACATAATAGAAGGAATTTCTCAAGGATTACTCTATCTTCACAAGTACTCAAGACTGAAAGTCATTCACAGAGACTTAAAAGCTAGTAATATACTTCTTGATGAGAATATGAACCCCAAAATTTCTGATTTTGGATTAGCAAGAATGTTTACACGACAAGAATCCACAACTAACACTAGTAGGATTGTTGGCACCTATGGTTACATGTCTCCTGAATATGCCATGGAAGGAGTTTTCTCTGTAAAGTCTGATGTGTATAGCTTTGGAGTCTTACTACTTGAAATTGTTAGTGGAAGAAGAAACACTAGCTTCTACGATGGTGACCGCTTTCTAAATCTAATAGGACATGCATGGGAGTTATGGAATGAAGGTGCATGTCTAAAATTAATTGATCCATCTCTAACTGAGTCACCTGATCTTGATGAAGTGCAAAGATGTATTCATATTGGTCTCTTATGTGTAGAACAAAATGCAAATAATCGACCCTTAATGTCACAAATCATATCAATGTTATCAAACAAGAATCCAATTACCTTACCTCAAAGACCAGCATTCTATTTTGGAAGCGAGACCTTTGATGGGATAATATCTTCTACAGAGTTTTGTACGGATTCAACGAAAGCAATAACCACTTCCAGAGAAATAGAATCAAGTGAACATCAATGGGGAGAAGAAGCACGAAACCAACTCCATTTCTCTTAA 2421 0.3854 MVCYKLGESHFLLVLTCLWLWLWWSTRIHVIAAYHSLRPGDTLNSTTELCSENDKYCLGFSQFSSAHNSTYLRIYAKGKGDWNMWIGNRNQPLDMDSAVLSLSHSGVLKIESKDMEPIILYSSTQPSNNTVATLMNTSNFVLQRLQPGGTESTVLWQSFDYPTDKLLPGMKLGVNHKTGRNWSLVSSMGYANPALGAFRLEWEPRRRELLIKQRGQLCWTSGELRKNIGFMHNTHYMIVSNDDESYFTITTLNEELTRWELLKTGQLINRNGDDNVARADMCYGYNTDGGCQKWEDIPFCRNPGDAFELKEVYLNLNLKNFLANSSYSPSDCRDTCWKNCSCDGFTDYYDDGTGCIFVYLNLTEGADFASGGEKFYILVKNTHHKGTKKWIWISILIVAALFSICAFILYLALKKRKLRFEDKNRKEMEINKMEDLATSNRFYDARDPEDEFKKRQDLKVFSYTSVLLASNDFSTENKLGQGGFGPVYKGIQPNGQEVAIKRLSKTSSQGTAEFKNELMLIGELQHMNLVQLLGYCIHGEERILIYEYMHNKSLDFYLFDGTRSKLLDWKKRFNIIEGISQGLLYLHKYSRLKVIHRDLKASNILLDENMNPKISDFGLARMFTRQESTTNTSRIVGTYGYMSPEYAMEGVFSVKSDVYSFGVLLLEIVSGRRNTSFYDGDRFLNLIGHAWELWNEGACLKLIDPSLTESPDLDEVQRCIHIGLLCVEQNANNRPLMSQIISMLSNKNPITLPQRPAFYFGSETFDGIISSTEFCTDSTKAITTSREIESSEHQWGEEARNQLHFS* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1789 806 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 767 - -
Gso15g1789 806 Gene3D Transferase(Phosphotransferase) domain 1 549 751 - -
Gso15g1789 806 Gene3D - 29 159 IPR036426 -
Gso15g1789 806 PIRSF SRK 273 794 IPR024171 GO:0004674
Gso15g1789 806 PIRSF SRK 7 284 IPR024171 GO:0004674
Gso15g1789 806 CDD PAN_AP_plant 320 379 - -
Gso15g1789 806 CDD STKc_IRAK 479 744 - -
Gso15g1789 806 ProSiteProfiles Protein kinase domain profile. 473 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1789 806 SMART blect_4 40 162 IPR001480 -
Gso15g1789 806 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 186 IPR036426 -
Gso15g1789 806 SMART serkin_6 473 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1789 806 MobiDBLite consensus disorder prediction 786 806 - -
Gso15g1789 806 Pfam D-mannose binding lectin 84 186 IPR001480 -
Gso15g1789 806 SUPERFAMILY Protein kinase-like (PK-like) 457 760 IPR011009 -
Gso15g1789 806 Pfam PAN-like domain 309 357 IPR003609 -
Gso15g1789 806 ProSiteProfiles Bulb-type lectin domain profile. 34 155 IPR001480 -
Gso15g1789 806 Gene3D Phosphorylase Kinase; domain 1 436 548 - -
Gso15g1789 806 Pfam Protein tyrosine and serine/threonine kinase 475 744 IPR001245 GO:0004672|GO:0006468
Gso15g1789 806 ProSitePatterns Serine/Threonine protein kinases active-site signature. 594 606 IPR008271 GO:0004672|GO:0006468
Gso15g1789 806 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 13 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1789 Gso-Chr15 34736122 34745488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1789 461 783 Receptor kinase-like Gene Family AT3G45860 53.153 4.93e-121 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso15g1789 PK_Tyr_Ser-Thr 1e-48 CL0016