Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1766 ATGGATTTGATGTTCCCTCTGAAACCCCACTGTGTTATTCTCAAGGCACCACTCTCTTCTTCTCTCTTGTTCCCTTTTCCTCTCAGGTTTCGGGCTGTCACCGCTTTCAAGCATGCCAATATTCAATGCGAGCTTGAAGGCAGACCCAATGGTGCTCTCTCTGGTGACTTCGACCCTCGCTTCATTGACAGGCAAAAAGCACTGGAAGCAGCGATGAATGATATAAACAACAACTTTGGAAAGGGCAGTGTTACAAGACTGGGCAGTGCTGGTGGAGCTTTGGTTGAAACTTTTCCCAGTGGTTGTTTGACATTAGACTGTGCTTTAGGTGGTGGTCTCCCTAAAGGAAGAATTATAGAGATATATGGACCAGAAAGCAGTGGGAAAACCACCCTAGCACTTCATGCTATTGCGGAAGTGCAGAAGTTAGGAGGCAATGCAATGCTTGTTGATGCGGAGCATGCTTTTGATCCTGCATATTCTAAAGCATTAGGAGTGGATGTAGAAAATTTAATTGTGTGCCAACCTGATCATGGAGAGATGGCTCTTGAGAACCGAATGTGTAGATCTGGTGCCATAGATCTCATTTGTGTGGATTCTGTGTCAGCTCTCACTCCACGGGCTGAAATTGAAGGGGAGATTGGAATGCAGCAAATAGGATTGCAAGCCCGTCTTATGAGCCAAGCTTTACGTAAGATGTCTGGAAATGCATCTAAAGCTGGTTGTACTCTTATATTTTTGAATCAAATAAGATATAAGATTGGTGTCTATTATGGAAATCCAGAAGTGACTAGTGGTGGAATTGCATTGAAGTTCTTTGCGTCACTTCGGCTAGAAGTTCGTCCTACAGGGAAGATAAAGTCTGCTAAAGGAGATGAAGAAATTGGCCTTAAAGTTCGTTTAAGAGTCCAAAAGAGCAAGGTATCAAGGCCATACAAAATAGCTGAATTTGAAATTATATTTGGAGAGGGTATCAGTAAGTTGGGATGCATTTTAGATTGTGCAGAAATGACGGATATTGTCTCAAAGAAAGGCTCTTGGTACAGCTATGGAGATCATCGGTTGGGACAAGGAAGGGACAAAGCAATACAGTACTTAAAAGAGAATACACATCTTTTAGAAGAAATTGAGAAGGTTGTTCGGTCTTCATTGATTGATGGAACTAACCAAACAAGTCCTGTACACATGAAGAATAGTTCAGTGCTACATCAAGATGATGATATGTTTGAGGAAAGGTAA 1239 0.4205 MDLMFPLKPHCVILKAPLSSSLLFPFPLRFRAVTAFKHANIQCELEGRPNGALSGDFDPRFIDRQKALEAAMNDINNNFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIIEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDHGEMALENRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEVRPTGKIKSAKGDEEIGLKVRLRVQKSKVSRPYKIAEFEIIFGEGISKLGCILDCAEMTDIVSKKGSWYSYGDHRLGQGRDKAIQYLKENTHLLEEIEKVVRSSLIDGTNQTSPVHMKNSSVLHQDDDMFEER* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1766 412 SMART AAA_5 115 284 IPR003593 -
Gso15g1766 412 ProSiteProfiles RecA family profile 1. 94 250 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Gso15g1766 412 CDD recA 63 384 IPR013765 GO:0003697|GO:0005524|GO:0006281
Gso15g1766 412 PANTHER RECA 61 401 IPR013765 GO:0003697|GO:0005524|GO:0006281
Gso15g1766 412 SUPERFAMILY RecA protein, C-terminal domain 326 382 IPR023400 -
Gso15g1766 412 ProSiteProfiles RecA family profile 2. 255 330 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Gso15g1766 412 PRINTS RecA protein signature 151 180 IPR013765 GO:0003697|GO:0005524|GO:0006281
Gso15g1766 412 PRINTS RecA protein signature 221 250 IPR013765 GO:0003697|GO:0005524|GO:0006281
Gso15g1766 412 PRINTS RecA protein signature 266 294 IPR013765 GO:0003697|GO:0005524|GO:0006281
Gso15g1766 412 PRINTS RecA protein signature 301 330 IPR013765 GO:0003697|GO:0005524|GO:0006281
Gso15g1766 412 PRINTS RecA protein signature 355 372 IPR013765 GO:0003697|GO:0005524|GO:0006281
Gso15g1766 412 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 325 IPR027417 -
Gso15g1766 412 MobiDBLite consensus disorder prediction 390 412 - -
Gso15g1766 412 Pfam recA bacterial DNA recombination protein 66 326 IPR013765 GO:0003697|GO:0005524|GO:0006281
Gso15g1766 412 TIGRFAM tigrfam_recA: protein RecA 63 381 IPR013765 GO:0003697|GO:0005524|GO:0006281
Gso15g1766 412 Gene3D - 93 391 IPR027417 -
Gso15g1766 412 Hamap Protein RecA [recA]. 64 387 IPR013765 GO:0003697|GO:0005524|GO:0006281
Gso15g1766 412 ProSitePatterns recA signature. 269 277 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Gso15g1766 412 PANTHER MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOG 61 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1766 Gso-Chr15 33351837 33374151 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1766 15 33351837 33374151 Gso9g0866 9 18643699 18648274 GST