Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1759 ATGTGTTCGCGCCGAAGTGGGGAGCGCCCCGGAGCGGCGCAGATGGACGTGAAGATATTGGATGTGGCGGCGGAGGGCGGCTACGGGCGGGTGTTCCGGTGCCTCGACGTCCACACGGGCGCCCTCGTGGCCATGAAGCAGATCACGATGGTCAGGTTGAGCCAGGGCATTCCGGCGCAGATCATCCGGGAAGTGTCGCTCCTCAGAGAGCTCCACCACGCCAACATCGTGAAGCTGCTCAGGGTAGGGTTCACAGAGAACAGGTACGTCAACCTCGTCTTCGAGCATCTCGATTACGACCTTCATCAGTTCATTGTCAACCGAGGTTACCCCAAGGATGCCACCACTGTGAAGAGTTTCATGTTCCAGATACTCTCTGCTGTGGCTTACTGTCACTCGCGGAAGGTTCTGCACAGAGATTTGAAACCAAGCAATGTACTGATCAATCATTCCAAAAGGTTGATCAAACTAGCAGATTTCGGTTTGGCTAGAGAGTTTGCAGATGACTTTTTATATACTGAGAAGTTAGGAACTTCCTGGTATAGGGCACCTGAAATATTGTGCCACTCCAGACAATATTCAACTCAAGTTGATTTGTGGTCTGTTGGCTGCATATTTGCTGAGATGGTAATTGGACAACCTTTATTCCAAGTTATTAATTGCCGGGATGAATTGGAGGGGATTTTCAAATTGTTAGGTACCCCCACAGAGGAAACATGGCCAGGAATCACTAAATTAATGCCTAACCTTCATATCTACTGCTCCAAATTTGATCCATTGGGCCTGGAAACATTTGTTACTGATCTGGAACCAAGTGGCCTGAATCTACTATCAATGATGCTATGCTTGGACCCAAGTAAAAGGATTTCTGCGGAAGCTTCTCTAAAGCATGCTTACTTTACAGATGTGAATTGGATTTAG 921 0.4832 MCSRRSGERPGAAQMDVKILDVAAEGGYGRVFRCLDVHTGALVAMKQITMVRLSQGIPAQIIREVSLLRELHHANIVKLLRVGFTENRYVNLVFEHLDYDLHQFIVNRGYPKDATTVKSFMFQILSAVAYCHSRKVLHRDLKPSNVLINHSKRLIKLADFGLAREFADDFLYTEKLGTSWYRAPEILCHSRQYSTQVDLWSVGCIFAEMVIGQPLFQVINCRDELEGIFKLLGTPTEETWPGITKLMPNLHIYCSKFDPLGLETFVTDLEPSGLNLLSMMLCLDPSKRISAEASLKHAYFTDVNWI* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1759 306 PANTHER CELL DIVISION PROTEIN KINASE 3 304 - -
Gso15g1759 306 CDD STKc_CDK_like 25 300 - -
Gso15g1759 306 SUPERFAMILY Protein kinase-like (PK-like) 19 305 IPR011009 -
Gso15g1759 306 Gene3D Transferase(Phosphotransferase) domain 1 97 300 - -
Gso15g1759 306 ProSiteProfiles Protein kinase domain profile. 17 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1759 306 Pfam Protein kinase domain 25 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1759 306 SMART serkin_6 17 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1759 306 PANTHER CYCLIN-DEPENDENT KINASE 3 304 - -
Gso15g1759 306 Gene3D Phosphorylase Kinase; domain 1 19 96 - -
Gso15g1759 306 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1759 Gso-Chr15 33179600 33183370 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1759 24 304 Core Cell Cycle Gene Families AT3G48750 48.763 5.11e-91 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Gso15g1759 Pkinase 7.4e-68 CL0016