Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1748 ATGGAAATATCAAATGATTCAGGTACTAAGAAACCTAAAAGGCTGACATCTGTTGTCTGGAATCACTTTGAAAGGATTAGAAAGGCGGACATCTGCTATGCTGTTTGTGTGCATTGTAACAAGAAACTTAGTGGATCAAGTAACAGTGGAACTACTCATCTGAGAAATCACTTGATGCGGTGTCTGAAAAGATCAAACTTTGACGTGTCTCAACTACTTGCAGCAAAGAGAAGGAAAAAAGATAATACCATCAGCCTAGCAAACATTGGATTTGATGAAGGTCAGAGGAAAGAAGAATATATAAAGCCAACAATCATCAAGTTTGAACCAGAGCATAAGAAAGATGAAATCATTAACTTTGGAAGTAGTAAATTTGATCAGGAAAGGAGTCAACTTGATCTTGCGCGCATGACCATATTACATGGATACCCACTGAGCTTGGTTGAACAAGTAGGATTCAAGGTCTTTGTGAAGAACCTCCAGCCTCTCTTTGAGTTCATGCCAAACAGTGATGTAGAGATTTCTTGTATCGATATCTACAGGAGGGAGAAAGAGAAAGTGTTTGATATGATAAACAGACTACATGGTAGGATTAATCTATCTATTGAAATGTGGTCTTCAACAGAAAATTCCTTGTATTTGTGTTTATCTGCTCATTATATTGATGAGGAATGGACATTACAAAAGAAAATCCTTAACTTCGTCACACTTGATTCTTCTCATACTGAAGACTTACTTCCAGAAGTGATTATCAAATGTCTCAATGAATGGGATATTGACCACAAGCTTTTTGCCGTGACACTTGATGATTGTTCCATCGATGATGACATCACTCTTAGAATCAAGGAGCGAGTTTCCGAGAAAAGGCCTTTTTTAAGTACTCGGCAATTACTTGATGTACGCTCTGCAGCACATCTCGTAAATTCCATTGCTCAAGATGCCATGGATGCATTACATGAGGTGATCCAAAAGATTCGAGAGAGCATCAGATATATTAGAAGTTCACAAGTAGTGCAAGGAAAATTTAATGAAATTGCTCAACGTGCTAGGATTAACACTCAAAAGTTCTTATTTCTTGATTTTCCAGTTCAGTGGAAGTCTACATATCTCATGCTTGAAACTGCACTAGAATACAGGAGTGCCTTTTCTCTCTTCCAAGAACACGATCCCTCCTATTCAGCAAGTCTAACTGACGAAGAGTGGGAATGGGCTAGTTCTGTTACTGGCTACTTAAAACTTTTAGTTGAAATTACGAATGTATTTTCAGGCAACAAATTTCCTACAGCGAATATATACTTCCCTGAGATTTGTGATGTCCATATGCAATTAATTGACTGGTGCAGAAGTTCAGATGATTTTCTTAGTCCCATGGCTTTGAAGATGAAGGCTAAATTTGACAGGTACTGGAGCAAGTGCAGTTTAGCTTTAGCTGTAGCCGCAGTCCTAGATCCTAGGTTTAAAATGAAGTTGGTCGAGTACTACTACTCTCTAATTTATGGCAGCACTGCTCTGGAGCGTATCAAGGAAGTTTCTGATGGTATCAAAGAACTTTTTAATGCGTATTCTATCTGTTCAACTATGATTGATCAAGGCTCAGCCTTGCCTGGCAGCAGTTTACCTAGTACTTGTGGTTCCAGAGATAGGCTAAAAGGCTTTGACAGATTCCTTCATGAGACATCACAGAGTCAGTCTATCATATCAGACTTAGACAAGTACTTAGAAGAACCAATCTTTCCACGCAATTCCGATTTTAACATATTGAACTGGTGGAAAGTCCACATGCCAAGGTACCCAATTTTGTCTATGATGGCACGTGATGTTCTTGGGACTCCAATGTCAACTCTGGCGCCAGAATTGGCATTTAGCACTGGGGGCAGAGTGCTAGATTCTTCTCGTAGTTCACTAAACCCGGACACGCGAGAGGCTTTGATATGCACCCAAGATTGGCTCCAAAATGAATCTGGAAATCTAAATCCATCTCCAATCCATTCTGCTCTACCTCTTCTCATCGAATGA 2016 0.3948 MEISNDSGTKKPKRLTSVVWNHFERIRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMRCLKRSNFDVSQLLAAKRRKKDNTISLANIGFDEGQRKEEYIKPTIIKFEPEHKKDEIINFGSSKFDQERSQLDLARMTILHGYPLSLVEQVGFKVFVKNLQPLFEFMPNSDVEISCIDIYRREKEKVFDMINRLHGRINLSIEMWSSTENSLYLCLSAHYIDEEWTLQKKILNFVTLDSSHTEDLLPEVIIKCLNEWDIDHKLFAVTLDDCSIDDDITLRIKERVSEKRPFLSTRQLLDVRSAAHLVNSIAQDAMDALHEVIQKIRESIRYIRSSQVVQGKFNEIAQRARINTQKFLFLDFPVQWKSTYLMLETALEYRSAFSLFQEHDPSYSASLTDEEWEWASSVTGYLKLLVEITNVFSGNKFPTANIYFPEICDVHMQLIDWCRSSDDFLSPMALKMKAKFDRYWSKCSLALAVAAVLDPRFKMKLVEYYYSLIYGSTALERIKEVSDGIKELFNAYSICSTMIDQGSALPGSSLPSTCGSRDRLKGFDRFLHETSQSQSIISDLDKYLEEPIFPRNSDFNILNWWKVHMPRYPILSMMARDVLGTPMSTLAPELAFSTGGRVLDSSRSSLNPDTREALICTQDWLQNESGNLNPSPIHSALPLLIE* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1748 671 Pfam Domain of unknown function (DUF4413) 422 521 IPR025525 GO:0003677
Gso15g1748 671 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN RICESLEEPER 1-LIKE 6 653 - -
Gso15g1748 671 Pfam BED zinc finger 17 60 IPR003656 GO:0003677
Gso15g1748 671 SMART bed5 14 64 - -
Gso15g1748 671 SUPERFAMILY Ribonuclease H-like 192 652 IPR012337 -
Gso15g1748 671 Pfam hAT family C-terminal dimerisation region 568 650 IPR008906 GO:0046983
Gso15g1748 671 ProSiteProfiles Zinc finger BED-type profile. 14 69 IPR003656 GO:0003677
Gso15g1748 671 SUPERFAMILY beta-beta-alpha zinc fingers 17 64 IPR036236 -
Gso15g1748 671 PANTHER BED FINGER-RELATED 6 653 IPR045259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1748 Gso-Chr15 32780452 32784450 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1748 15 32780452 32784450 Gso9g0833 9 17255561 17259439 GST