Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0702 ATGGGCGAGGAATCTCAAGGGATTAAGCTGTTTGGTGCGCTGATTACATTGAAGGGTGGGGAAGTAAAGAAAGGAGAAAAAGGAAGCGAATATGAGAGGGTGGAGAAGAGAGCAGAGAAGATAATACCCTGCCCGAGATGCAAGAGCATGGAAACTAAATTCTGTTACTTCAACAACTACAACGTTAATCAGCCGAGGCATTTTTGCAAGAGCTGCCAGAGGTACTGGACGGCTGGTGGGGCCCTCCGAAACGTCGCGGTCGGCGCCGGGCGCCGGAAGGCTAAGTCACCGTGCCATGGAGCCGGTGACTTCATGGATGGGCGTGCCTATGAAACTTCTGAAGATGAAAACAGGTTTGAGATGAATCAGGGACACGTTGCCATGCCCAACACTCATTTCCGCCAGATTTTTCAGGCCAAGCGCCAGAGAATCACCTCAGGAGCATCAAGGTCAATGAAATCATGTACGAAAACACAACTTGGAATTATTATGAACAAGAAATTAAGGACTTCAGCAGCGAGGGACCAAAGCGTGTCTTGA 540 0.4926 MGEESQGIKLFGALITLKGGEVKKGEKGSEYERVEKRAEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKSCQRYWTAGGALRNVAVGAGRRKAKSPCHGAGDFMDGRAYETSEDENRFEMNQGHVAMPNTHFRQIFQAKRQRITSGASRSMKSCTKTQLGIIMNKKLRTSAARDQSVS* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0702 179 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 4 149 - -
Gso15g0702 179 ProSitePatterns Zinc finger Dof-type signature. 44 80 IPR003851 GO:0003677|GO:0006355
Gso15g0702 179 Pfam Dof domain, zinc finger 40 96 IPR003851 GO:0003677|GO:0006355
Gso15g0702 179 ProSiteProfiles Zinc finger Dof-type profile. 42 96 IPR003851 GO:0003677|GO:0006355
Gso15g0702 179 PANTHER CYCLIC DOF FACTOR 2 4 149 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0702 Gso-Chr15 6281799 6283781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0702 3 146 C2C2-Dof Transcription Factor Family AT2G34140 50.000 9.57e-44 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gso15g0702 zf-Dof 1.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0702 - - gmx:100820604 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0702 15 6281799 6283781 Gso15g0702 15 6281799 6283781 ECH
Gso15g0702 15 6281799 6283781 Gso11g2577 11 41819824 41821905 GST