Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1897 ATGCACTTGAGCGAGAACGAAGGGATAGAGGGGAAGGCCTTCGTGGTCACCGGTGGACTGGGATTCGTAGGATCTGCTCTCTGCTTGGAGCTCATCCGAAGAGGTGCTAGAGAGGTGCGAGCCTTTGACCTCCGCCTCTCTTCTCCATGGTCGCGTCCTCTCAAGGTCAAGGGAGTCCTTTGCGTCCAAGGGGATGTTGCCCGCAAAGAAGACGTGGAAAGGGTCCTCCGCGGTTCCGACTGCGTATTCCACCTTGCGGCCTTCGGAATGTCAGGCAAAGAGATGCTCCAATTTGGTCGCATTGATGAAGTCAACATAAATGGGACTTGCCATGTTATCGATGCTTGCCTCCACCTCGGCATCAAAAGGCTTGTCTACTGTAGCACAAACAATGTTGTCTTTGGCGGTCAACAGATCATCAACGGGAATGAGACATTGCCCTATTTCCCAATTGATCACCATGTCGATCCATATGGCCGCAGTAAATCAATTGCTGAACAGTTGGTTCTTAAGAACAATGCCCGTACTCTCAAGAACGACTCCGGGAATCGTCTTTACACTTGTGCTGTTCGTCCAGCTGCAATCTATGGACCGGGTGAAGACAGGCACCTTCCAAGGATCGTAACCTTGGCAAAGTTGGGTCTCCTTTTGTTCAGAATTGGCGACCAAACTGTAAAGTCAGATTGGCTTTTTGTGGATAACCTTGTCCTTGCTCTTATATTGGCGAGTATGGGACTTTTGGATGACAATCTTAGCAAGGGGAAACGTCCTGTTGCTGCTGGCCAGGCCTACTTTATATCTGATGGCTCCCCAGTCAATTCTTTTGAATTCCTGCACCCTCTACTTAGGAGTTTGGATTATGAACTGCCAAAGACTTCCCTACCGGTCGACCGTGCTCTTGTTCTCAGCAGGATTTGCTGGGCTGTTTATACAATCCTATATCCATGGCTCAATCGGTGGTGGCTTCCACAGCCATTCATCCTTCCCTCTGAAGTACACAAGGTGGGAGTGACCCATTATTTCTCTTATCTTAAAGCCAAAGAGGAGATTGGCTATTTTCCCATGGTGACCTCGCGAGAGGGGATGGCTTTGACCATATCTTACTGGCAAGAGAGGAAACGAACAACTCTGGATGGACCAACAATCTACGCGTGGTTGTTTTGTGTCATTGGAATGATCTCACTGTTTTGTGGTGCTTTCTTACCTGACATAGGGATCATGTCCCTTCTCAGAGCTACATGTCTATTTGTCTTTCGGTCAATGTGGGTGACAAGGTTGGTGTTTCTTCTGGCTACAGCTGCACATATTGCTGAGGCCATTTATGCTTGGTACCTGGCTAAGAGGATGGATCCTGCCAATGCAAGAGGATGGTTTTGGCAAACTTTTGCTCTTGGGATGTTTTCGTTGCGTTTACTATTGAAAAGAGCAAGGAAATAG 1437 0.4823 MHLSENEGIEGKAFVVTGGLGFVGSALCLELIRRGAREVRAFDLRLSSPWSRPLKVKGVLCVQGDVARKEDVERVLRGSDCVFHLAAFGMSGKEMLQFGRIDEVNINGTCHVIDACLHLGIKRLVYCSTNNVVFGGQQIINGNETLPYFPIDHHVDPYGRSKSIAEQLVLKNNARTLKNDSGNRLYTCAVRPAAIYGPGEDRHLPRIVTLAKLGLLLFRIGDQTVKSDWLFVDNLVLALILASMGLLDDNLSKGKRPVAAGQAYFISDGSPVNSFEFLHPLLRSLDYELPKTSLPVDRALVLSRICWAVYTILYPWLNRWWLPQPFILPSEVHKVGVTHYFSYLKAKEEIGYFPMVTSREGMALTISYWQERKRTTLDGPTIYAWLFCVIGMISLFCGAFLPDIGIMSLLRATCLFVFRSMWVTRLVFLLATAAHIAEAIYAWYLAKRMDPANARGWFWQTFALGMFSLRLLLKRARK* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1897 478 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 15 295 IPR002225 GO:0003854|GO:0006694|GO:0016616
Gso14g1897 478 Gene3D - 4 375 - -
Gso14g1897 478 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 360 - -
Gso14g1897 478 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 376 IPR036291 -
Gso14g1897 478 Pfam Transmembrane protein 254 387 473 IPR028110 -
Gso14g1897 478 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 42E MEMBER 1 10 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1897 Gso-Chr14 51424792 51427152 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1897 14 51424792 51427152 Gso17g2225 17 41921883 41924343 GST
Gso14g1897 14 51424792 51427152 Gso4g0169 4 1502441 1505935 PCT
Gso14g1897 14 51424792 51427152 Gso6g0157 6 1473071 1476525 PCT