Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1876 ATGCTCGATTCTGTGCTTCTGGCGCTTTTCTTGCCGTGCCTCGGCATGAGCGCCGTTTTCATCGTCTACATGTGCCTTCTCTGGTACGCCACCAACCACCACTCCGACCCCGCGCTACCGGCCAAGCCTGTCTCCGACACCGGAATCTCCCCTTCCCAGCTCGACAAGCTCCCCAGAATCACCGGAAAGGACCTTCTCATGGGAAACGAATGCGCCGTCTGCCTGGACGAGATCGGAACAGAGCAACCGGTTCGGGTGGTTCCCGGTTGCAACCACGCCTTCCATTTGGAATGCGCCGACACCTGGCTCTCCAAGCACCCTCTCTGCCCTCTCTGCAGAGCCAAACTCGACCCTTCGCTTTTCTCTTCTTCCCAAAATCCATGCTGA 387 0.584 MLDSVLLALFLPCLGMSAVFIVYMCLLWYATNHHSDPALPAKPVSDTGISPSQLDKLPRITGKDLLMGNECAVCLDEIGTEQPVRVVPGCNHAFHLECADTWLSKHPLCPLCRAKLDPSLFSSSQNPC* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1876 128 Pfam Ring finger domain 69 113 IPR001841 -
Gso14g1876 128 SUPERFAMILY RING/U-box 55 119 - -
Gso14g1876 128 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL23 1 128 - -
Gso14g1876 128 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 37 119 IPR013083 -
Gso14g1876 128 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 128 - -
Gso14g1876 128 SMART ring_2 71 112 IPR001841 -
Gso14g1876 128 ProSiteProfiles Zinc finger RING-type profile. 71 113 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1876 Gso-Chr14 51183897 51185032 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1876 14 51183897 51185032 Gso17g2213 17 41822867 41823586 GST
Gso14g1876 14 51183897 51185032 Gso4g0189 4 1673774 1675141 PCT
Gso14g1876 14 51183897 51185032 Gso6g0172 6 1617637 1618670 PCT
Gso4g0189 4 1673774 1675141 Gso14g1876 14 51183897 51185032 PCT
Gso6g0172 6 1617637 1618670 Gso14g1876 14 51183897 51185032 PCT