Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1845 ATGGCTCTCCTAACTTCCTTGCCTGAACAGTTCTCCAGTACCCCCAAACGCCACAAACGTAAGCCACAACAACAACAACAGAAACAAAAGCAAAAGCAAAAGCAAAAGCAAAAACAGAAACAGAAACCAGCCTCTTCATGGGACCAAATCAAGAACCTCTTAACCTGCAAACAGATGGAAGAGTCGAGAGTGCACGACCCTTCGAAAATAACTGGGTACTCGAAGCTAGGGTCTTCTTGCAGCTCCATATGCAGCTTCAGAGATGTGGTTCATGGGAACACACGTGTTGTGCATAGGTCTGATAACTCCTCACCAGAGAGTAGTTCTCTGGGTCAGGAAACTAATGGGTTACTCACTAGGAAACCTGTCACTACTACTACTACTCGTTCCGCAAAATCAAACGGCGGAGCAACCTGCACGTCATCATCATCATCTTCCAGAGGCATGCAATTCAGGAAGCTTTCTGGGTGTTATGAATGTCACATGATCATTGACCCTAGCAGGTTACCAATTGCGAGGAGCACTGTGTGTGCTTGCTCTCACTGTGGTGAGGTCTTCCCTAAAATGGAAAGTTTGGAGCTTCATCAAGCTGTTCGTCATGCCGTTTCGGAGCTAGGTCCGGAGGATTCGGGTCGGAACATAGTGGAAATAATCTTCAAATCGAGCTGGTTGAAGAAGGACAACCCGATTTGCAAGATCGAACGGATACTAAAAGTGCACAACACCCAACGCACCATCCAACGGTTTGAGGAGTGCAGGGACACCGTAAAGAACCGTGCGCTGGGCAGCACCAAGAAAAACCCCAGGTGCGCAGCCGACGGCAACGAACTCTTGCGGTTCCACTGCACCACCTTAACGTGCGCACTGGGTGCACGTGGCTCTTCCTCCCTCTGCGCCTCCGTACCCGGCTGCAGCGTCTGCACCATCATCAGGCACGGTTTCCAAGGCGGGTGCGGCGGCGGTGGAGACCACGCGAGGGCGAAGGGCGTGAGAACCACCGCCAGCAGCGGTCGGGCCCACGACTCTGTGGTGTGCGGTGACGCCACGCGCAGGGCCATGCTGGTGTGTCGCGTGATCGCGGGCAGAGTGAAGCGCGTGGTGGAGGACGCGCCGTCGGAGGAGGAACACGTGTCGTATGATTCCGTTGCGGGGTACGCTGGAATCTACTCGAATCTCGAGGAGCTTGTTGTTTTCAATCCAAAGGCTATCCTTCCTTGTTTCGTGGTCATTTACAAAGTTCCTTTGTGTTAG 1251 0.5276 MALLTSLPEQFSSTPKRHKRKPQQQQQKQKQKQKQKQKQKQKPASSWDQIKNLLTCKQMEESRVHDPSKITGYSKLGSSCSSICSFRDVVHGNTRVVHRSDNSSPESSSLGQETNGLLTRKPVTTTTTRSAKSNGGATCTSSSSSSRGMQFRKLSGCYECHMIIDPSRLPIARSTVCACSHCGEVFPKMESLELHQAVRHAVSELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEECRDTVKNRALGSTKKNPRCAADGNELLRFHCTTLTCALGARGSSSLCASVPGCSVCTIIRHGFQGGCGGGGDHARAKGVRTTASSGRAHDSVVCGDATRRAMLVCRVIAGRVKRVVEDAPSEEEHVSYDSVAGYAGIYSNLEELVVFNPKAILPCFVVIYKVPLC* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1845 416 ProSiteProfiles Zinc finger C2H2 type domain profile. 177 205 IPR013087 -
Gso14g1845 416 Gene3D - 201 413 - -
Gso14g1845 416 SUPERFAMILY ADP-ribosylation 202 412 - -
Gso14g1845 416 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 30 413 - -
Gso14g1845 416 ProSitePatterns Zinc finger C2H2 type domain signature. 177 200 IPR013087 -
Gso14g1845 416 MobiDBLite consensus disorder prediction 1 49 - -
Gso14g1845 416 MobiDBLite consensus disorder prediction 17 39 - -
Gso14g1845 416 MobiDBLite consensus disorder prediction 97 145 - -
Gso14g1845 416 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 30 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1845 Gso-Chr14 50896969 50900504 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gso14g1845 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1845 14 50896969 50900504 Gso17g2183 17 41535455 41539372 GST