Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1838 ATGGACCGACGCTGGCCATGGAAGAAAAAATCGTCGGACAAGACCGTGCTTGAGAAAGCAGCTGGCGAATTGGACTCTGCTGCGGGTGCTGGCACTCAGAAGCCGAGCTACGTCCAAATCTCTGTAGAGTCATATTCCCATCTGACTGGTTTGGAGGATCAAGTGAAGACATATGAAGAAAAAGTTCAGACACTGGAGGAAGAGATCAAGGAATTAAATGAAAAACTGTCAGCAGCTAATTCAGAGATAAATACCAAGGAAAGCTTGGTAAAACAGCATGCTAAAGTAGCAGAAGAGGCTGTTTCAGGCTGGGAAAAGGCTGAAGCAGAAGCTTTGGCATTGAAGAACCATCTGGAAACTGTCACTCTTGCAAAACTTACTGCTGAGGACCAGGCGTCACAGTTAGATGGTGCTCTTAAAGAGTGTATGCGTCAGATAAGAAAGCTGAAGGAAGAACATGAGCAGAAAATACAGGAAGTTGCTCTGATAAAAACTAAGCAATTGGACAAGATTAAGGGTGAGTTTGAGGCTAAGATAGAGAATTTTGAACAGGAGCTTCTCAGGTCTGCTGCTGACAATGCCGCTCTGTCAAGGTCCTTGCAAGAGCGCTCTAACATGATAATCAATTTAAGTGAAGAAAAAGCTCATGCTGAGGCTGAAATTGAGCTTCTCAAGGGTAACATTGAATCATGCGAAAGAGAAATCAATTCACTCAAATATGAGCTTCATGTTATTTCCAAAGAGCTTGAGATTCGCAATGAAGAAAAGAATATGAGTATGAGGTCTGCAGAAGCTGCTAACAAGCAGCACATGGAGGGTGTTAAAAAAATTGCTAAATTAGAGGCAGAATGCCAAAGATTACGTGGTCTAGTGCGGAAAAAGTTGCCTGGTCCTGCTGCACTTGCACAAATGAAGCTAGAAGTTGAAAGTCTTGGTCGAGAATATGGAGAAACACGATTAAGGAAGTCTCCTGTCAAACCTTCTAGTTCTCACATGTCCACATTGCCTGGGTTCTCCCTTGATAATGCACAGAAATTCCACAAAGATAATGAATTTCTTACAGAGCGTTTATTGGCAATGGAAGAAGAGACAAAGATGCTGAAAGAAGCTTTGGCAAAACGTAACAGTGAGTTGCAGGCTTCAAGGAGTAGTTTTGCTAAAACTTTGAGCAAACTTCAAATTTTGGAAGCACAAGTTCAGACAAGTAATCAGCAGAAGGGATCTCCTCAATCCATCATCCATATAAATCATGAAAGCATTTACAGTCAAAATGCAAGCAATGCACCAAGCTTCATCTCCTTGTCTGAAGATGGAAATGATGATGTGGGAAGTTGTGCGGAGTCTTGGTCTACAGCAATTATCTCTGAGTTATCCCAATTCCCTAAAGAAAAAAATACTGAAGAATTGAGCAAATCTGATGCCACTAAAAAGTTGGAACTAATGGATGACTTTCTGGAGGTGGAGAAATTGGCTCGGTTATCAAATGATTTCAGTGGAGTTTCAGTTACTTCAAACAATATGGCAAATGAAACTGTGACCAATGATGTATCAGAGTTCAGTACTGAGAAAGATGTTCCCTCTAACACCCAAGATAATAGTGAGCCATATCCATTGCCTAGTGAGGTTTCTTCTGCTGAGGAATTGTCAGCACCTGATCCCCAATCTGATGTTCCAGCTGGCTTGTCGCTAGCAGAGCTTCAATCAAGAATATCATCAGTTTTTGAGTCCACGGCTAAGGGTGCTGACATAGAGAAGATCCTGAAGGATATTAAACACGTTCTTGAAGAGGCATGCTGCACTTCCATCCAGGACTCTGTATCTGCCATTCCCCATGATGTCAAGCCTTCTGATACTACGTGTGATGAGCAGGGTAATACTGAAGATGCTGCTGGCTCAAATGCAGAAAAAGAAATTATTTCGTCCCAGCAACCTATAGAATATGTGCAGATGACTTCGGATTTAGAAGTCGCAACTTCTCAAATTCATGACTTTGTCTTGTCCCTAGCCAAAGAAGCAATGACAGCTCATGATATATCTTCTGATGGAGATGGAATAAGTGAAAAGATGAAGGAGTTCTCTGTCACTTTTAATAAAGTTACATGCAATGAAGCAAGTTTGCTGCAGTTCGTTCTTGACCTGTCTAATGTTCTAGCCAAAGCAAGTGAATTCAGATTCAATATCCTTGGTTATAAGGGTACAGAAGCTGAAACTAACAGTCCTGATTGCATAGATAAGATTGCTCTGCCAGAAAATAAGTTAGTTCAAGACAATTCATCAGGAGAGAGATATCAAAATGGTCATTCACATATTCTTAATCCCTGTTCTGATCCCGAGGTTCCTGATGATGGAAATTTGGCCCCAGGCTATGAATCAAATGCCACGTCACAGAAGTTCTCAATGGAGGACTTCGAAGAATTGAAATTAGAGAAAGAGAAGGCAGTTGCTGATCTGTCAAAGTGTGCGGAAAATCTTGAAATGACCAAGTCTCGATTACTAGAGACAGAGCAATATCTAGCTGAAGTTAAATCACAATTGGCTTCTGCTCAAAGATCAAACAGCCTGGCTGAGACACAACTAAAATGTATGACAGAATCTTACAGGACAATTGAAGCACGCACAAAGGATTTTGAAACTGAGCTTAATCATCTGCGAATGAAGACAGAAACTCTGGAGAATGAACTTGAAGATGAAAAGAAGGCTCATGAAGAAGCTTTGGCTAAGTACAAGGAGATAGAAGAACAACTACAAAGGAATGAGAGCTTAGCTGCTGATAAAGACATTAAGACTAAGCAGGAGAGAAATTTGGCAGCTGCTGCTGAAAAATTAGCTGAGTGTCAAGAAACCATATTTCTTCTTGGCAAGCAGTTAAAATCTCTGCATCCTCAAACAGAGCCAATGGGATCTCCTTATTCAAAGGCCGAAGGCTTCACAGAGTGTGAACCTAATAGCCCAACTTTTCAGGATCAAGCGGAGATGGACAGTGCTAGTTCTGCATTTGTGCAAAGACTGGGTGGAGAGTCCCCCTTACATTTTTCTAACAGTTTATACAGTCCATCAGATAATGAGTCAAACTTTCCAGCCATATCTTCTGTACAGAATCCAAACCACAGGCCTACTAAGTCAACCTCTTCGTCAGCTTCTTCCACTCCTACACCGGAGAAACACACCCGAGGTTTCAGTAGATTCTTTTCATCTAAAGGAAAAAACGGTCATTGA 3216 0.4142 MDRRWPWKKKSSDKTVLEKAAGELDSAAGAGTQKPSYVQISVESYSHLTGLEDQVKTYEEKVQTLEEEIKELNEKLSAANSEINTKESLVKQHAKVAEEAVSGWEKAEAEALALKNHLETVTLAKLTAEDQASQLDGALKECMRQIRKLKEEHEQKIQEVALIKTKQLDKIKGEFEAKIENFEQELLRSAADNAALSRSLQERSNMIINLSEEKAHAEAEIELLKGNIESCEREINSLKYELHVISKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGREYGETRLRKSPVKPSSSHMSTLPGFSLDNAQKFHKDNEFLTERLLAMEEETKMLKEALAKRNSELQASRSSFAKTLSKLQILEAQVQTSNQQKGSPQSIIHINHESIYSQNASNAPSFISLSEDGNDDVGSCAESWSTAIISELSQFPKEKNTEELSKSDATKKLELMDDFLEVEKLARLSNDFSGVSVTSNNMANETVTNDVSEFSTEKDVPSNTQDNSEPYPLPSEVSSAEELSAPDPQSDVPAGLSLAELQSRISSVFESTAKGADIEKILKDIKHVLEEACCTSIQDSVSAIPHDVKPSDTTCDEQGNTEDAAGSNAEKEIISSQQPIEYVQMTSDLEVATSQIHDFVLSLAKEAMTAHDISSDGDGISEKMKEFSVTFNKVTCNEASLLQFVLDLSNVLAKASEFRFNILGYKGTEAETNSPDCIDKIALPENKLVQDNSSGERYQNGHSHILNPCSDPEVPDDGNLAPGYESNATSQKFSMEDFEELKLEKEKAVADLSKCAENLEMTKSRLLETEQYLAEVKSQLASAQRSNSLAETQLKCMTESYRTIEARTKDFETELNHLRMKTETLENELEDEKKAHEEALAKYKEIEEQLQRNESLAADKDIKTKQERNLAAAAEKLAECQETIFLLGKQLKSLHPQTEPMGSPYSKAEGFTECEPNSPTFQDQAEMDSASSAFVQRLGGESPLHFSNSLYSPSDNESNFPAISSVQNPNHRPTKSTSSSASSTPTPEKHTRGFSRFFSSKGKNGH* 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1838 1071 Pfam Filament-like plant protein, long coiled-coil 86 966 IPR008587 -
Gso14g1838 1071 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1071 - -
Gso14g1838 1071 Coils Coil 838 858 - -
Gso14g1838 1071 Coils Coil 200 283 - -
Gso14g1838 1071 Coils Coil 132 185 - -
Gso14g1838 1071 MobiDBLite consensus disorder prediction 960 1071 - -
Gso14g1838 1071 MobiDBLite consensus disorder prediction 508 558 - -
Gso14g1838 1071 MobiDBLite consensus disorder prediction 614 636 - -
Gso14g1838 1071 Coils Coil 803 823 - -
Gso14g1838 1071 Coils Coil 928 948 - -
Gso14g1838 1071 Coils Coil 873 921 - -
Gso14g1838 1071 MobiDBLite consensus disorder prediction 978 996 - -
Gso14g1838 1071 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 1071 - -
Gso14g1838 1071 MobiDBLite consensus disorder prediction 619 636 - -
Gso14g1838 1071 MobiDBLite consensus disorder prediction 508 539 - -
Gso14g1838 1071 MobiDBLite consensus disorder prediction 1007 1055 - -
Gso14g1838 1071 Coils Coil 48 89 - -
Gso14g1838 1071 Coils Coil 343 370 - -
Gso14g1838 1071 SUPERFAMILY Tropomyosin 803 964 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1838 Gso-Chr14 50817488 50823799 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1838 14 50817488 50823799 Gso17g2176 17 41460278 41466617 GST
Gso14g1838 14 50817488 50823799 Gso4g0224 4 2034784 2040565 PCT
Gso14g1838 14 50817488 50823799 Gso6g0203 6 1934506 1940413 PCT
Gso4g0224 4 2034784 2040565 Gso14g1838 14 50817488 50823799 PCT
Gso6g0203 6 1934506 1940413 Gso14g1838 14 50817488 50823799 PCT