Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1829 ATGGACGGAGAGGATATTAGGTCTGGGACCAAGAAGAAGCGATCCAAGAAGGAAATTGGTTTCGACGACGATGACGAGCCCATTGGGTCAATCTTTAAGCTGAAGAGGTCCAAGAAGAAGGGTAGTGGTGGTAGTAGTGATGCTGCTGTTGTTAGGGAGAAAGAGGATTTGGGGGGTATGGATGATAATGATACCTTGGCTAGCTTTAGGAAGAGGTTGAAGGGTCCTAAGAGAGATCAGGGATCTGGGGTCACAAGAGGAGCAAGTCCTGCTTTGCATGTGTCGGATGAAGATTTGGTTGCTTTGGGACCTAAGGGTAAGGATGAGAAAGTGGTGGTGCCCGTGCCTGGTGATGAGGACATGCAGATGCAGGGTTGTTCTGATCAACAACACATGGAGGATTCATTGTCCGCGATTTTCAATAAGGCACAGTTTAGTTCTACCAGGAAATCTCGTGGCAGGGGTTCAAGGCAGAAAAGGGGGATTCAGAATGTGGATAGTGAAGGTTTTGTGGAAACTGTGGATTCTGTGGTTGGAAGTAGATCTGGATCTGCTTTTGGCTCGAAATTGGTTGGGGGAAATGTCGAGTCTGCGGATGCTTTGCCTCAAGCATCTGAACCGGTTGTTGCATCTGTGGTGGATGACCAGAAGTGCGGTGATGACTGTTTTCAAGAGGAAGCTGTGAAGGGCAATCGTAATTTGGACATTCCAGATGGACCATCTCAGTCGAGCAATGTCTGCCATGGATATAGGCAGCAATTGTCTTGTGTACAAGTTGGAGATATTTCTTGTCATTCTGACCAAAAGGTTGGATTGCAGGAAAGTGTTCTCAGTGATGGTTTAAATAAGTTACCTACCACGTCGCATGATGTCTCTCTCTCAAAAGTGGGGGAAGGCAAAAGAGGATTTACTGAGATAGGAGAGTCGGAGAACAGACTGACGGATGAACAAGCAAAAGTGTGCAACAGTGCTTCAGAACCTGATGTTTCTACTTCTGCTGGGGAAAAAAATGTCTTAACTTCTTGCCACACCGAACCCTTGATTAAATCAACTGAAAATATATTGAATGAGAATAATAATATGGTTGCTAGAAAAGTTTTCCAGGAATCCTCATGTAATGGAGCTCTGAAGTTATCTGGATGCCATATGGAAGTAGATGGAGGTGGAAAATCAGAAACTGAGATTGTTTCTGATAGAAATTTCTGTGATTATAGTAGTTCAGATACAAAGGCTGAAGTGCAAGATTTTGTTTTAGGGTTTTCACCTAAAACAAATAATGTAACGGTCAGTGGTAGTTTATCTTCTATGGTGTCTAATGAAGCCAATAAAGCTGAATTGACTGCCCATTCAAATCACCCAGAGAAACCTCTAGAAGCTTGCAATATTCCAAAAGACTATACTGCTTCAATTCTGAAATGTAGTTCAGTGTTAGATCCAATTCAATCTGATGGATCATCTCTTCAGTCTTCTATTCCAGATGAAAATGGGAACTCTGCAGAATACTGTGCCCCTGCGTCTGATTTTGCTGATAACGAGGGTAAGATATCAAGCATTCCACGGGCGGTGCGAAAGGCCAAAATGCGTAAGCATGGAGACATGACATATGAGGGAGATGCTGATTGGGAAATTTTAATTGATGATCAAGCTCTAAATGAAAGTCAAGTTATGACAGATGGTGACCGCACTCTTAGAGCAAGATTGAAGCATGATTCCTCTTTGAATACTGGTGAAGACTCTGAAAATGTTGCTGTTGTAGCAGTATCAGCTGGGCTGAAAGCTCGTAAAGTTGGTCCAATTGAGAAAATAAAGTTTAAGGAGATCTTGAAGCGGAAAGGTGGTCTTAAGGAATATTTAGATTGCAGAAATCAGATTTTAAGTCTTTGGAACAGAGATGTCACACGTATTTTGCCTCTTGCTGAATGTGGAGTTAGTGATACTCATTCTGAGCATGGAAGTCCTCGTTTTTCTCTTATTAGGGAGGTCTATGCATTTCTCGATCAATATGGTTATATAAATGTTGGAATTGCCTCTCAGAAGGAGAATGTTGGAAGTAGTGCAAGGCATTGTTATAAACTGGTAAAAGAAAAGGGTTTTGAGGAAAGTCTCGCAGCTTCAATGGCTGACCCTGAAGATGGAGTTTCCTTTCTTGTTGGTCAGACCAAAATGTCAGATACTTCCAATGAGATTAACAATGGTCTAACAAAGGATTGTGATGACCTAACTACTGAAGCTGCAGAAGGCATGAGGCATGCTAATGAAATGAAGACGGATTTATCAAACATGACACACCAGGCAGAAAGAAAAAAAATTGATTACCAGGAAAATGACAGTTCTGTTCCGTCTTCCAACTTCCCTGATTGCAGATTGATTTCTCAGGTAGCTGAAGAGAAAATCAATGACTCTACCAGCATAAAATCTGCCTTAGATGCTCTGGTAGGTGATCATCTGCAGTCTGATTTAGATCCTAGGAAGAGAGTAATTGTCATTGGAGCAGGTCCTGCTGGGCTAACTGCTGCTCGCCACTTGCAACGTCAAGGATTTGCTGTAACTGTGCTTGAGGCTAGGAGTAGGATAGGAGGTCGTGTATTTACTGATCACTCGTCACTTTCTGTCCCTGTTGATCTTGGTGCTAGCATTATAACTGGTGTTGAGGCTGATGTGGCCACTGAGAGAAGACCAGATCCTTCCTCATTGATTTGTGCTCAGTTGGGTCTTGAGTTGACAGTGTTGAACAGTGATTGCCCTCTTTATGACATAGTGACAGGACAAAAAGTTCCTGCAGATATGGATGAAGCACTAGAAGCTGAGTATAATAGTCTTATTGATGACATGGTATTGGTTGTTGCTCAGAAAGGGGAACAAGCAATGAGAATGTCTCTTGAAGATGGTTTAGAATATGCTCTTAAGATTCGCCGTATGGCACGCTCTGAAAGCAGTGAAGAAACTGAACAAAATAATTCTGCAGATAGTCCGTTTGATTCCAAAAAGGACAGTACTGTGGAAAAAAAATTTGGTGAGGAGATTTTGAGCCCTCAGGAAAGGAGGGTTATGGATTGGCACTTTGCTCATTTGGAGTATGGTTGTGCAGCTTTGCTTAAGGATGTTTCTCTTCCCTACTGGAATCAAGATGATGTGTATGGAGGTTTTGGGGGAGCTCATTGTATGATAAAAGGGGGTTACAGCTCTGTTGCTGAGTCTCTGGGAGAAGGACTTACAATTCACTTGAACCATGTTGTAACAAATGTGTCATATGGTATCAAGGAACCTGGCCAGAATAATAAAGTCAAAGTTTCTACAGCAAATGGCAATGAGTTCTTTGGCGATGCTGTCCTTGTGACTGTTCCACTTGGTTGTTTGAAGGCTGAAACTATACAATTCTCCCCACCTTTGCCACAGTGGAAATGTTCTTCTGTTCAGCGTCTTGGTTATGGAGTTCTAAATAAAGTGGTTTTGGAATTTCCTAGTGTATTTTGGGATGATGCTGTGGACTACTTTGGAGCAACTGCTGAGGAGAGAAGCAGTAGAGGTCACTGCTTTATGTTCTGGAATGTCAGGAAAACAGTTGGGGCTCCTGTTCTTATATCATTAGTGGTTGGTAAGGCAGCCATAGACGGTCAAAGCTTGAGCTCTTATGATCATGTTAACCATGCATTGAAGGTTCTCCGTAAACTTTTTGGGGAGGACTCAGTTCCTGATCCTGTTGCATATGTTGTCACTGATTGGGGTAGGGATCCTTTTAGTTATGGTTCTTATTCTTATGTTGCTGTTGGAGCATCTGGAGAAGACTATGATATAATAGGGAGACCAGTTGATAACTGTTTGTTTTTTGCTGGTGAAGCAACCTGCAAAGAGCACCCAGATACTGTTGGTGGTGCAATGATGAGTGGACTACGAGAGGCTGTTCGCATAATTGACATATTGAGCAGTGGAAATGATTATATTGCAGAGGTGGAGGCATTGGAAGCTGCTCGGGGACAGTTAGACACTGAAAGGGATGAAGTTAGGGATATAATAAAGAGACTTGATGCATTAGAGCTTTCTAACATAATGTACAAGAACTCTTTAGATGGTGCTCAAATTTTAACCCGGGAAGCTTTGTTAAAGGAAATGTTCAATAATACAAAAACCACTGCTGGGCGCTTACATGTGGCCAAACAATTGCTAACTCTTCCTGTTGGAAACTTGAAGTCTTTTGCTGGAAGTAAAGAGGGACTAGCCATTCTCAATTCATGGATACTGGACTCAATGGGGAAGGATGGTACCCAACTCTTGAGGCACTGTTTGCGTCTACTTGTCCGTGTTTCGACTGATCTTCTTGCTGTACGATTGTCAGGAATGGGGAAAACTGTGAAGGAAAAAGTTTGTGTACATACTAGCCGTGATATTCGTGCTATAGCAAGTCAGTTGGTCAATGTATGGCTTGAAGTTTTCCGCAAGGAAAAAGCTTCTAATGGTGGATTGAAGATATCAAGACAAACAACTGCTGTAGATTTATCAAAGAGAAAATCTGTGAAAGATTCAGCCTCGGGAAAGCCACCTCTGAGCACATATCATGGTACCATTGAGAATAAAGGAGGCTTGCTGAATCCTACCTCTGCTGGAAGCAATTCAGCTTCCACTGCACATGTGAAGAAATTGCACAGCAAACAAGGAAGACAACCAGCAGCATATGACTCAAGGCATGAGGTCAGTTCGTCCAGGTCTAAAGGTTCAATAGACACAGTAGTTGCTGAGAAGGAGGATAACCTCTGCACTGTATCTGAAGAAGAACAGGCTGCTATAGCTGCTGCTGAAGCTGCCCGTGCTAAAGCTCTTGCTGCTGCTGAGGCATATGCCTCTGCAGAAGCCAGATGTAATACGCTGTTACAGCTTCCAAAGATACCCTCATTCCACAAATTTGCTAGACGTGAACAGACTTCACAAAATGATGAGTATGATAGTAGAAAAAGATGGCCTGGTGGTGTCTATGGAAGGCAGGATTGTATTTCAGAGATTGATTCTAGGAATTGCAGGGTTAGGGACTGGTCTGTTGATTTCTCCGCTGCTTGTGTCAACCTTGATAATTCCAGAATGCCAGTTGATAATCTCTCACAGAGGAGTCATTCAAATGAGATTGCCAGCCATTTGAATTTCAGAGAGCACTCAGGAGAAAGTGTTGCTGGGGACAGCAGTATATATACAAAAGCTTGGATTGATACAGCTGGTGGTATTGCAATTAAAGACCATCACGCCATAGAGAGATGGCAATCTCAAGCAGCTGCAGCTGATTCTTATTTTTCTAACCCAACTATTCATTTGAAGGATGAGGAGGATTCAAATGCCTGTTCAAAGTTACCCAGCTGGAAGCATGATGGTATTGCAAATGAGAGCTCTATTTCACAGGTTACTGTAAGTAAGGAGGCTCAAAAAGGTCATTCACGAGGAGCAGATCACATTAAACAGGCTGTTGTGGACTATGTTGCATCACTACTTATGCCCCTGTATAAGGCAAGGAAACTAGACAAGGATGGATACAAGGCTATAATGAAGAAAAGTGCAACAAAGGTCATGGAGCAAGCCACAGATGCAGAAAAAGCCATGGCTGTTCGTGAGTTTCTAGATTTTAAGCGAAAGAATAAGATTCGCTCCTTTGTGGATGTATTGATTGAGAGACACATGACAACGAAACCAGACATGAAATCTTAA 5685 0.4248 MDGEDIRSGTKKKRSKKEIGFDDDDEPIGSIFKLKRSKKKGSGGSSDAAVVREKEDLGGMDDNDTLASFRKRLKGPKRDQGSGVTRGASPALHVSDEDLVALGPKGKDEKVVVPVPGDEDMQMQGCSDQQHMEDSLSAIFNKAQFSSTRKSRGRGSRQKRGIQNVDSEGFVETVDSVVGSRSGSAFGSKLVGGNVESADALPQASEPVVASVVDDQKCGDDCFQEEAVKGNRNLDIPDGPSQSSNVCHGYRQQLSCVQVGDISCHSDQKVGLQESVLSDGLNKLPTTSHDVSLSKVGEGKRGFTEIGESENRLTDEQAKVCNSASEPDVSTSAGEKNVLTSCHTEPLIKSTENILNENNNMVARKVFQESSCNGALKLSGCHMEVDGGGKSETEIVSDRNFCDYSSSDTKAEVQDFVLGFSPKTNNVTVSGSLSSMVSNEANKAELTAHSNHPEKPLEACNIPKDYTASILKCSSVLDPIQSDGSSLQSSIPDENGNSAEYCAPASDFADNEGKISSIPRAVRKAKMRKHGDMTYEGDADWEILIDDQALNESQVMTDGDRTLRARLKHDSSLNTGEDSENVAVVAVSAGLKARKVGPIEKIKFKEILKRKGGLKEYLDCRNQILSLWNRDVTRILPLAECGVSDTHSEHGSPRFSLIREVYAFLDQYGYINVGIASQKENVGSSARHCYKLVKEKGFEESLAASMADPEDGVSFLVGQTKMSDTSNEINNGLTKDCDDLTTEAAEGMRHANEMKTDLSNMTHQAERKKIDYQENDSSVPSSNFPDCRLISQVAEEKINDSTSIKSALDALVGDHLQSDLDPRKRVIVIGAGPAGLTAARHLQRQGFAVTVLEARSRIGGRVFTDHSSLSVPVDLGASIITGVEADVATERRPDPSSLICAQLGLELTVLNSDCPLYDIVTGQKVPADMDEALEAEYNSLIDDMVLVVAQKGEQAMRMSLEDGLEYALKIRRMARSESSEETEQNNSADSPFDSKKDSTVEKKFGEEILSPQERRVMDWHFAHLEYGCAALLKDVSLPYWNQDDVYGGFGGAHCMIKGGYSSVAESLGEGLTIHLNHVVTNVSYGIKEPGQNNKVKVSTANGNEFFGDAVLVTVPLGCLKAETIQFSPPLPQWKCSSVQRLGYGVLNKVVLEFPSVFWDDAVDYFGATAEERSSRGHCFMFWNVRKTVGAPVLISLVVGKAAIDGQSLSSYDHVNHALKVLRKLFGEDSVPDPVAYVVTDWGRDPFSYGSYSYVAVGASGEDYDIIGRPVDNCLFFAGEATCKEHPDTVGGAMMSGLREAVRIIDILSSGNDYIAEVEALEAARGQLDTERDEVRDIIKRLDALELSNIMYKNSLDGAQILTREALLKEMFNNTKTTAGRLHVAKQLLTLPVGNLKSFAGSKEGLAILNSWILDSMGKDGTQLLRHCLRLLVRVSTDLLAVRLSGMGKTVKEKVCVHTSRDIRAIASQLVNVWLEVFRKEKASNGGLKISRQTTAVDLSKRKSVKDSASGKPPLSTYHGTIENKGGLLNPTSAGSNSASTAHVKKLHSKQGRQPAAYDSRHEVSSSRSKGSIDTVVAEKEDNLCTVSEEEQAAIAAAEAARAKALAAAEAYASAEARCNTLLQLPKIPSFHKFARREQTSQNDEYDSRKRWPGGVYGRQDCISEIDSRNCRVRDWSVDFSAACVNLDNSRMPVDNLSQRSHSNEIASHLNFREHSGESVAGDSSIYTKAWIDTAGGIAIKDHHAIERWQSQAAAADSYFSNPTIHLKDEEDSNACSKLPSWKHDGIANESSISQVTVSKEAQKGHSRGADHIKQAVVDYVASLLMPLYKARKLDKDGYKAIMKKSATKVMEQATDAEKAMAVREFLDFKRKNKIRSFVDVLIERHMTTKPDMKS* 1895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1829 1894 ProSiteProfiles SWIRM domain profile. 582 682 IPR007526 GO:0005515
Gso14g1829 1894 MobiDBLite consensus disorder prediction 145 164 - -
Gso14g1829 1894 PANTHER FLAVIN MONOAMINE OXIDASE 508 1890 - -
Gso14g1829 1894 SUPERFAMILY FAD-linked reductases, C-terminal domain 1142 1253 - -
Gso14g1829 1894 SUPERFAMILY FAD/NAD(P)-binding domain 822 1306 IPR036188 -
Gso14g1829 1894 MobiDBLite consensus disorder prediction 1525 1544 - -
Gso14g1829 1894 Gene3D - 932 1259 - -
Gso14g1829 1894 PRINTS Adrenodoxin reductase family signature 825 847 - -
Gso14g1829 1894 PRINTS Adrenodoxin reductase family signature 848 861 - -
Gso14g1829 1894 MobiDBLite consensus disorder prediction 975 999 - -
Gso14g1829 1894 MobiDBLite consensus disorder prediction 1 33 - -
Gso14g1829 1894 Gene3D - 581 685 IPR036388 -
Gso14g1829 1894 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 508 1890 - -
Gso14g1829 1894 Coils Coil 1320 1347 - -
Gso14g1829 1894 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1402 1485 IPR035441 -
Gso14g1829 1894 MobiDBLite consensus disorder prediction 100 115 - -
Gso14g1829 1894 MobiDBLite consensus disorder prediction 1 132 - -
Gso14g1829 1894 Pfam Flavin containing amine oxidoreductase 834 1304 IPR002937 GO:0016491
Gso14g1829 1894 MobiDBLite consensus disorder prediction 49 79 - -
Gso14g1829 1894 Pfam SWIRM domain 592 672 IPR007526 GO:0005515
Gso14g1829 1894 Gene3D - 826 1302 IPR036188 -
Gso14g1829 1894 SUPERFAMILY Homeodomain-like 580 677 IPR009057 -
Gso14g1829 1894 MobiDBLite consensus disorder prediction 1498 1571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1829 Gso-Chr14 50679319 50692809 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-SWI3 Gso14g1829 Amino_oxidase 3.2e-107 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1829 14 50679319 50692809 Gso17g2165 17 41302495 41315570 GST
Gso14g1829 14 50679319 50692809 Gso2g2143 2 46067020 46072300 GST
Gso18g0298 18 2691419 2696582 Gso14g1829 14 50679319 50692809 PCT
Gso13g1322 13 28644084 28649275 Gso14g1829 14 50679319 50692809 PCT
Gso14g1829 14 50679319 50692809 Gso18g0298 18 2691419 2696582 PCT
Gso14g1829 14 50679319 50692809 Gso13g1322 13 28644084 28649275 PCT