Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g1828 ATGAACGCAATTCGGTCCCGTTGGTTGACGAGAATGGCAGAAGACATTGGGAAAAGCAACCTCGAATCCTCTTCTGCTTCAACAACTTCCCGAGGCTTCTGGCCTTCTGTCTTACGTTGGATCCCCTCTTCCACCGATCACATCATCAATGCTGAAAAACGCCTTCTCTCTCTTGTCAAGACTCCGTATGCTCAAGAACAGGTCAATATAGGTTCCGGTCCACCTGATTCCAAAGTTAGATGGTTCCGTTCATCTAGCAATGAACCACGGTTTATTAACACGGTTACATTTGACAGTAAGGATGATTCTCCTACGCTGGTGATGGTTCATGGATATGCAGCATCGCAGGGTTTCTTCTTTCGCAATTTTGATGCCCTTGCCTCCCGTTTCAGAGTGATTGCTATTGATCAACTTGGTTGGGGTGGATCTAGCAGGCCTGACTTTACATGCAGAAGCACTGAAGAAACTGAGGCATGGTTCATTGATTCTTTTGAGGAATGGAGAAAGGCCAAAAACCTGAGCAATTTTATACTACTTGGACATTCTTTTGGTGGTTATGTTGCTTCCAAGTACGCACTTAAGCACCCTGAGCATGTCAATCACTTGATTCTGGTGGGACCTGCTGGATTTTCATCAGAATCAGAAAGAATTACAAAGTTCTTATCAACATGGAAAGGATCAATCCTGAACCAAATATGGGAATCTAATTTTACACCTCAGAAAATCATCAGAGGTTTAGGTCCTTGGGGTCCTGATATGGTCCTCAAGTATACCAGTGCCAGGTTTGTTACATATACAACTGGGGAAACGCTGACAGAATCTGAATCGAGATTACTGACAGATTATGTTTACCATACTTTAGCAGCCAAAGCTAGTGGCGAGCTGTGCTTAAAATATATATTTTCATTTGGAGGACTCCCGAGGTCACCTCTTCTTCACAGTGCTTCAGAGTGGAAGGTGCCTACCACCTTCATATATGGTTTTCAGGACTGGATGAATTATGAAGGAGCCCAAGAAGCACGCAAACAAATGAAGGTTCCATGTGAAATCCTTAGGGTTCCCCAGGCCGGGCACTTTGTGTTCATTGACAACCCAAGTGGCTTCCATTCAGCAGTGTTTTATGCTTGTAGAAGGTTTCTTAGGCCTGATCCAGACAGTGAATCCCTTCCTGAAGGGCTAACCTCTGCATAG 1191 0.4442 MNAIRSRWLTRMAEDIGKSNLESSSASTTSRGFWPSVLRWIPSSTDHIINAEKRLLSLVKTPYAQEQVNIGSGPPDSKVRWFRSSSNEPRFINTVTFDSKDDSPTLVMVHGYAASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCRSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVASKYALKHPEHVNHLILVGPAGFSSESERITKFLSTWKGSILNQIWESNFTPQKIIRGLGPWGPDMVLKYTSARFVTYTTGETLTESESRLLTDYVYHTLAAKASGELCLKYIFSFGGLPRSPLLHSASEWKVPTTFIYGFQDWMNYEGAQEARKQMKVPCEILRVPQAGHFVFIDNPSGFHSAVFYACRRFLRPDPDSESLPEGLTSA* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g1828 396 PRINTS Epoxide hydrolase signature 129 144 IPR000639 GO:0003824
Gso14g1828 396 PRINTS Epoxide hydrolase signature 178 191 IPR000639 GO:0003824
Gso14g1828 396 PRINTS Epoxide hydrolase signature 192 205 IPR000639 GO:0003824
Gso14g1828 396 PRINTS Epoxide hydrolase signature 320 336 IPR000639 GO:0003824
Gso14g1828 396 PRINTS Epoxide hydrolase signature 353 375 IPR000639 GO:0003824
Gso14g1828 396 Gene3D alpha/beta hydrolase 90 378 IPR029058 -
Gso14g1828 396 SUPERFAMILY alpha/beta-Hydrolases 93 372 IPR029058 -
Gso14g1828 396 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN-RELATED 10 389 - -
Gso14g1828 396 PRINTS Alpha/beta hydrolase fold signature 129 144 IPR000073 -
Gso14g1828 396 PRINTS Alpha/beta hydrolase fold signature 178 191 IPR000073 -
Gso14g1828 396 PRINTS Alpha/beta hydrolase fold signature 192 205 IPR000073 -
Gso14g1828 396 Pfam alpha/beta hydrolase fold 104 222 IPR000073 -
Gso14g1828 396 PANTHER RE40534P-RELATED 10 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g1828 Gso-Chr14 50673516 50677114 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1828 14 50673516 50677114 Gso17g2164 17 41293467 41296703 GST
Gso14g1828 14 50673516 50677114 Gso4g0235 4 2143775 2148108 PCT
Gso4g0235 4 2143775 2148108 Gso14g1828 14 50673516 50677114 PCT