Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0758 ATGGAACCTGCAGGAGCCTTCCCTGATGGAGAATGGGATTTCTTTCGCCGAATATTTGCCGGTGAGGATCATGAGCATGATTTATTCACACCCCAATTTCCACTTCTGCTTGATGGCGATGATGAATTGAACATTGTGACACAACCCACATTTTGTGCTGCTCCTGAAGTTGGTGAAAATGAGCGTATGTTTTATTCTTTAGATGCTCACCACTCAAATTCTTCTCAGTATATTTCACAAGAAAGTAGCCATAGTAATAGTAGCAATTGTAGTGGTGATGACACTATCTTCATTGCCAATCCGGGTAGCACAAACTATTATTTTAGTTACCCTGATCATGTGCTAGCAAATAATGCATGTGTATATTCCATGGATGAGAAATATTTTGCCTCTTTTGTCCCATCGCTTGCTGACATTGTAACGGAAGAGAGTGTCAAGTTGCATGAAGATGTAGCAAGTGATGACAGATTGGAGAATTCTGAATGCAATCAAATGGAACCTATCGTTTTTCCCAGCAAGCAGTTGCAGCTCAAAAGGAAGCTTGATGTGCCTGCTGAAGATAAAATGAACAAAGGATCTGAGAATCAAAAGAAAAGGGCTCGTGCTTTAAAAGATGGGCAAGGATGCATGAAAAACACATGGTCCAAGAAGAATCAGAAACATGCCAGCAACGGGGAAGAAGCAGAAGAGACTAATGCAGGTTCAGATGGGCAAAGCTCTAGTAGTAACATGTCAGAGGATGATAACATTTCTAAATCTGCTCTCAACTCAAATGGGAAAACAAGAGCAAGTAGGGGATCAGCAACAGATCCCCAGAGTCTGTATGCAAGGAAAAGAAGAGAGAGAATAAATGAGAGACTAAGAATCCTACAGAATCTTGTCCCAAATGGAACCAAGGTTGATATAAGCACAATGCTTGAAGAGGCAGTCAATTACGTGAAATTTTTGCAGCTCCAGATCAAGCTTTTAAGCTCCGATGATCTATGGATGTATGCTCCACTTGCTTACAATGGGCTTGATATTGGACTCAATCTCAACTCCCTATCACTTTAA 1053 0.4093 MEPAGAFPDGEWDFFRRIFAGEDHEHDLFTPQFPLLLDGDDELNIVTQPTFCAAPEVGENERMFYSLDAHHSNSSQYISQESSHSNSSNCSGDDTIFIANPGSTNYYFSYPDHVLANNACVYSMDEKYFASFVPSLADIVTEESVKLHEDVASDDRLENSECNQMEPIVFPSKQLQLKRKLDVPAEDKMNKGSENQKKRARALKDGQGCMKNTWSKKNQKHASNGEEAEETNAGSDGQSSSSNMSEDDNISKSALNSNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQIKLLSSDDLWMYAPLAYNGLDIGLNLNSLSL* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0758 350 CDD bHLH_AtIND_like 268 330 - -
Gso14g0758 350 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 4 349 - -
Gso14g0758 350 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 4 349 - -
Gso14g0758 350 SMART finulus 273 322 IPR011598 GO:0046983
Gso14g0758 350 Gene3D - 269 325 IPR036638 GO:0046983
Gso14g0758 350 MobiDBLite consensus disorder prediction 184 279 - -
Gso14g0758 350 MobiDBLite consensus disorder prediction 184 205 - -
Gso14g0758 350 Pfam Helix-loop-helix DNA-binding domain 277 317 IPR011598 GO:0046983
Gso14g0758 350 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 267 331 IPR036638 GO:0046983
Gso14g0758 350 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 267 316 IPR011598 GO:0046983
Gso14g0758 350 MobiDBLite consensus disorder prediction 228 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0758 Gso-Chr14 7941827 7943957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0758 229 343 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 81.034 1.99e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gso14g0758 HLH 1.2e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0758 14 7941827 7943957 Gso17g2009 17 39451834 39454354 GST