Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0752 ATGGACCCATCTATCATGAAGCTTCTAGAAGATGATGAGGATGAAACAATGCATTCAGGGGTGGATGTGGAAGCTTTCCAGGCTGCCCTAAATAGAGATATAGGTGGAGCTGGGTCTACTTCACAGTTTTCTGGTTCAGATGCAGTGTTGTCTCAAGGAAGCAATAATATATCAAGTCAATCTTTATCACAGTGGCCTACTTCTAACCATGACACCCAAACTGACTGTCAAAAGCAAGAATCTAAAACTGCACAACAGCAAGAGCAACCTTCATCTGAGGTGGAACTGAAGCAGCACGGATCTCTTGCGGAACAACTACAGCATGTTGCTTCTCAGGACATAAATACTCCTCATTTATCACAGAAACAATCTCAAGATGAATGCCACCAAGCACCAGCTGTACAAGTTTCCCTCCCCAATTCTCAAGCTATCGGAATTCAGAATTCTGGAAAAGATCCAGTCCTTAATAATGAGGTAGTAAAGAATCATAACCCCAGCAGTGAATCTCAGTATGCAAAGTTGCAGCAGATGAGTAATCAACAGGCTACAGTCTCTGAGCAGCCGAGTAGTCAAGGAAATCGTAGTACTAGTAAACAAGTACCATTTGGCATGTTGCTACCCATCTTGCTTCCTCAACTTGCCAAAGACAGAGCCATGCAACTTCAAACTTTATTTGCTAAATTGAAGAAAGAGGAGATACCGAAAGACAGTTTTGTGCGGCTTATGAAAGGTATCGTAGGGGATCAGATGCTTAGATTAGCATTAGCAAAGGTGCAAGTGCAACCACAGATAAGGCCCAATCAAGCATCTGCTGGGCAGCAGCACCCTATGAGGATGCCAACTGTTGGTTCAGGTGCAAGGCAATTGAATGATCCCCATGCTTTAGCACAGATGCACCAGAGAAGTATGAATGCTGCCGTTGACCAATCTCGCATGGGTTCTTCGGCTGGCCATACTATGGAGAGCAATGCTAGAAAATCTCAGGAACTGGATGTTAAATTAGAATCTCAAGGATTGCAACCAAGCCAATTGACATCTTCCAGTTCCAACACAGTTGGCCAAGAAACAGAAAGAACATCAGTTCACATACAAGGGCTTAATAAGCAGCAGCAACAACATCTACATTTCCCATCAGCATATGGAAATAGTGGTGTTAACTATAACCCTTTTTCTGGGACAACCAGTAGTTCCACTTCATCTATCAAATCACAATCGCATGATTCACACATGAGTCAAATTTTGCATCAAAGTATTGGTTCAAATCATCACTTAAGTGGGTCAACACATGGTTTGAATGTAATTGGTATGCCAAAACTTGAACAGCAGAATTCTTTTAATGATCCCAAGAGACTGCCAGGTGGATCTGTGTCTCCTGCTGTAAACAATACAGTGTCTCAACAAACTAAAAATGCTTGGCAACCATCAACAAACAAAGAACAAAATCTGGGCTTAATGTCATCTGTTTCTTATGTCAAAAAGGAACCTAGTGACTTATCTACTGAGCAGCAAAATAGGCATAGTTTGTCTAAATTGCATGGGTATTCTCCTGTTAATTCTGCTCAGCTTGAACAGGGTGGTGCTAGTCAAGGAACTGTAAAGGATGAGTTTTCAAGAGGTCAAGCACCTCCAAGCATGCCTCCTACATCTACTGGCTTGCTGCCACAAAGTTCTGCTTCCCCTTCTGTAATGACCCAACTAGACCCCAGTGTCTCGCTAAGCTCTCAGATCCCATCAAATGCTTCTGGAATTGGTGCAAGGACATCTCTTAAAAAGCCTGCTGCTGCCCAAAAGAAACCACATGAAGCACTTGGTTCCTCACCTCCTCCTGCAAATAAAAAACAAAAAACTTCTGGGGGATCTGTAGAACAAAGCATTGAACAACTTAATGATGTCACTGCTGTTAGTGGAGTTGACCTCAGGGAAGAGGAAGAGCAGTTATTTTCAGGGCCCAAAGAGGATAGTCGAGTGTCAGAAGCTTCTCGAAAGGCTGTACAAGAAGAAGAGGAAAGGCTGATCTTGCAGAAAGCTCCATTGCAAAAAAAATTAATTGACATCATGGCCAAGTGTGGCTTGAAGGGTATGAGCAATGATGTGGAGAAATGCTTGTCACTGTGTGTAGAGGAAAGGATGCGTGGGCTGATAAGTAACCTGATTAGAATATCAAAACAGAGGGTTGATTTTGAGAAAACAAGACATCGGACTGTTGTCACTTCAGATGTTCGGCAGCAAATCATGACAATAAATAGGAAAGTAAGGGAAGAGTGGGATAAAAAACAGGCAGAAGCAGAGAAGATTAGGAAACTAAATGATGTTGACAGCAATACTGGACTTGATGGTGACAAGGAGAAGGACGACGGCCGTGGTAAATCAATAAAGGTGAACAAGGAAGAGGATGAGAAGATGAGGACAAATGCTGCAAATGTTGCTGCCCGTGCTGCTTATGGAGGAGATGACATGCTGTCAAAGTGGCAACTAATGGCTGAGCAAGCCAAGCAGAAACGCGAAGGGGGGGTGGACGTGTTATCTGGTTCTCAACCAGCTAAAGATGTGAACCGCAAATTTTTATCAACATCTGGAAGAAGTACAAAGGATAATCAAGAAGGGGAGAAAAAAGGTTCATCTACTTTTATAGCAAGTTCAGTGGCTAGAAAACTTGGGAGGAGTCATGCCATGGCACTTCAAACTAGGGTAGCTCGAAGCATCTCTGTCAAGGATGTGATTGCAGTCCTGGAGAGGGAACCCCAGATGTCTAAATCTCCACTCATGCACCGCTTGTACGAGAGAATTCATTCGGATGCCCCAGTTTAA 2808 0.4316 MDPSIMKLLEDDEDETMHSGVDVEAFQAALNRDIGGAGSTSQFSGSDAVLSQGSNNISSQSLSQWPTSNHDTQTDCQKQESKTAQQQEQPSSEVELKQHGSLAEQLQHVASQDINTPHLSQKQSQDECHQAPAVQVSLPNSQAIGIQNSGKDPVLNNEVVKNHNPSSESQYAKLQQMSNQQATVSEQPSSQGNRSTSKQVPFGMLLPILLPQLAKDRAMQLQTLFAKLKKEEIPKDSFVRLMKGIVGDQMLRLALAKVQVQPQIRPNQASAGQQHPMRMPTVGSGARQLNDPHALAQMHQRSMNAAVDQSRMGSSAGHTMESNARKSQELDVKLESQGLQPSQLTSSSSNTVGQETERTSVHIQGLNKQQQQHLHFPSAYGNSGVNYNPFSGTTSSSTSSIKSQSHDSHMSQILHQSIGSNHHLSGSTHGLNVIGMPKLEQQNSFNDPKRLPGGSVSPAVNNTVSQQTKNAWQPSTNKEQNLGLMSSVSYVKKEPSDLSTEQQNRHSLSKLHGYSPVNSAQLEQGGASQGTVKDEFSRGQAPPSMPPTSTGLLPQSSASPSVMTQLDPSVSLSSQIPSNASGIGARTSLKKPAAAQKKPHEALGSSPPPANKKQKTSGGSVEQSIEQLNDVTAVSGVDLREEEEQLFSGPKEDSRVSEASRKAVQEEEERLILQKAPLQKKLIDIMAKCGLKGMSNDVEKCLSLCVEERMRGLISNLIRISKQRVDFEKTRHRTVVTSDVRQQIMTINRKVREEWDKKQAEAEKIRKLNDVDSNTGLDGDKEKDDGRGKSIKVNKEEDEKMRTNAANVAARAAYGGDDMLSKWQLMAEQAKQKREGGVDVLSGSQPAKDVNRKFLSTSGRSTKDNQEGEKKGSSTFIASSVARKLGRSHAMALQTRVARSISVKDVIAVLEREPQMSKSPLMHRLYERIHSDAPV* 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0752 935 Pfam Transcription initiation factor TFIID component TAF4 family 628 924 IPR007900 GO:0005669|GO:0006352
Gso14g0752 935 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 324 930 IPR045144 GO:0005669|GO:0006352
Gso14g0752 935 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 39 361 IPR045144 GO:0005669|GO:0006352
Gso14g0752 935 MobiDBLite consensus disorder prediction 642 662 - -
Gso14g0752 935 MobiDBLite consensus disorder prediction 542 585 - -
Gso14g0752 935 MobiDBLite consensus disorder prediction 520 535 - -
Gso14g0752 935 MobiDBLite consensus disorder prediction 442 480 - -
Gso14g0752 935 Pfam RCD1-SRO-TAF4 (RST) plant domain 195 259 IPR022003 -
Gso14g0752 935 MobiDBLite consensus disorder prediction 771 802 - -
Gso14g0752 935 MobiDBLite consensus disorder prediction 854 874 - -
Gso14g0752 935 MobiDBLite consensus disorder prediction 34 101 - -
Gso14g0752 935 MobiDBLite consensus disorder prediction 609 623 - -
Gso14g0752 935 CDD TAF4 623 924 IPR007900 GO:0005669|GO:0006352
Gso14g0752 935 MobiDBLite consensus disorder prediction 144 198 - -
Gso14g0752 935 MobiDBLite consensus disorder prediction 333 355 - -
Gso14g0752 935 ProSiteProfiles RST domain profile. 193 264 IPR022003 -
Gso14g0752 935 MobiDBLite consensus disorder prediction 309 323 - -
Gso14g0752 935 MobiDBLite consensus disorder prediction 309 355 - -
Gso14g0752 935 PANTHER IP01149P-RELATED 324 930 - -
Gso14g0752 935 PANTHER IP01149P-RELATED 39 361 - -
Gso14g0752 935 Gene3D Histone, subunit A 673 718 IPR009072 GO:0046982
Gso14g0752 935 MobiDBLite consensus disorder prediction 520 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0752 Gso-Chr14 7853796 7863970 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0752 14 7853796 7863970 Gso17g2014 17 39518635 39528383 GST