Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0736 ATGTTCACTGCACCTTTTCCCCACTCACTCTCTCACCTTTCTCCTAAAACATCTCCAGTGGGTTCTTCTTCTTCTATTACAACAACGTCGTCCAAGACCATGACCATGGCCATGGCCACGATCCTGCTCCTGTTCACGGTCTTCGCGGTTTCATCGGCCCTAGACATGTCGATAATCTCGTACGACAACGCCCACGCCGCCACGTCGCGCAGCGACGAGGAGCTGATGTCCATGTACGAGCAGTGGCTGGTGAAGCACGGCAAGGTGTACAACGCGCTCGGGGAGAAGGAGAAGAGGTTCCAGATCTTCAAGGACAACCTGCGATTCATCGACGACCACAACTCCCAAGAGGACCGAACCTACAAGCTCGGACTGAACCGGTTCGCGGATCTCACCAACGAGGAGTACAGGGCCAAGTACTTGGGAACCAAGATCGATCCCAACCGGAGGCTCGGCAAGACCCCGAGCAACCGATACGCGCCACGTGTCGGCGACAAACTACCTGAATCGGTTGATTGGAGGAAGGAAGGTGCTGTTCCTCCAGTCAAAGACCAAGGAGGCTGTGGGAGCTGTTGGGCATTCTCAGCAATCGGTGCAGTGGAAGGAATAAATAAGATAGTGACAGGTGAACTGATTTCGTTATCAGAACAAGAATTGGTGGATTGTGATACAGGATATAACGAAGGATGCAATGGAGGACTTATGGACTATGCATTTGAGTTCATTATCAACAATGGCGGCATTGATTCCGAAGAGGATTACCCTTACCGTGGTGTTGATGGTAGATGTGACACATATAGGAAAAATGCTAAGGTTGTTTCTATTGATGACTACGAAGATGTTCCTGCCTATGATGAGTTAGCTTTGAAAAAGGCTGTTGCAAATCAGCCCGTCAGTGTAGCTATTGAAGGAGGGGGCAGGGAATTTCAATTATATGTATCTGGTGTATTCACTGGGAGATGTGGCACAGCACTAGATCATGGTGTTGTGGCTGTTGGGTATGGTACAGCTAATGGTCATGATTATTGGATCGTAAGGAATTCATGGGGTCCTAGCTGGGGAGAAGATGGCTACATCAGGTTAGAAAGAAATCTTGCTAACAGCAGATCAGGCAAGTGTGGAATTGCAATTGAGCCATCTTATCCCCTTAAGAATGGTCCAAATCCACCTAATCCTGGACCATCACCCCCTTCACCTGTGAAGCCACCAAATGTCTGTGACAACTACTACAGCTGTGCTGATAGTGCTACTTGTTGCTGTATTTTCGAGTTCGGAAATGCTTGCTTTGAGTGGGGTTGCTGTCCTCTTGAGGGTGCTACCTGCTGTGATGACCACTACAGTTGCTGCCCTAACGACTATCCCATCTGCAACACTTATGCTGGAACTTGTCTCAAGAGCAAGAACAACCCATTCGGAGTGAAGGCATTGAGGCGTACTCCGGCTAAACCCCATTGGACCTTTGGGCGTAAGAACAAGGTCAGCAGTGCTTAA 1491 0.4916 MFTAPFPHSLSHLSPKTSPVGSSSSITTTSSKTMTMAMATILLLFTVFAVSSALDMSIISYDNAHAATSRSDEELMSMYEQWLVKHGKVYNALGEKEKRFQIFKDNLRFIDDHNSQEDRTYKLGLNRFADLTNEEYRAKYLGTKIDPNRRLGKTPSNRYAPRVGDKLPESVDWRKEGAVPPVKDQGGCGSCWAFSAIGAVEGINKIVTGELISLSEQELVDCDTGYNEGCNGGLMDYAFEFIINNGGIDSEEDYPYRGVDGRCDTYRKNAKVVSIDDYEDVPAYDELALKKAVANQPVSVAIEGGGREFQLYVSGVFTGRCGTALDHGVVAVGYGTANGHDYWIVRNSWGPSWGEDGYIRLERNLANSRSGKCGIAIEPSYPLKNGPNPPNPGPSPPSPVKPPNVCDNYYSCADSATCCCIFEFGNACFEWGCCPLEGATCCDDHYSCCPNDYPICNTYAGTCLKSKNNPFGVKALRRTPAKPHWTFGRKNKVSSA* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0736 496 SUPERFAMILY Granulin repeat 403 437 - -
Gso14g0736 496 PANTHER CYSTEINE PROTEASE 60 412 - -
Gso14g0736 496 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 342 361 IPR025661 -
Gso14g0736 496 Gene3D Cysteine proteinases 56 385 - -
Gso14g0736 496 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 60 412 - -
Gso14g0736 496 Gene3D Granulin 404 466 IPR037277 -
Gso14g0736 496 Pfam Granulin 417 464 IPR000118 -
Gso14g0736 496 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 185 196 IPR000169 -
Gso14g0736 496 PRINTS Papain cysteine protease (C1) family signature 185 200 IPR000668 GO:0006508|GO:0008234
Gso14g0736 496 PRINTS Papain cysteine protease (C1) family signature 327 337 IPR000668 GO:0006508|GO:0008234
Gso14g0736 496 PRINTS Papain cysteine protease (C1) family signature 342 348 IPR000668 GO:0006508|GO:0008234
Gso14g0736 496 SMART Inhibitor_I29_2 79 136 IPR013201 -
Gso14g0736 496 SUPERFAMILY Cysteine proteinases 71 383 IPR038765 -
Gso14g0736 496 SMART GRAN_2 406 463 IPR000118 -
Gso14g0736 496 MobiDBLite consensus disorder prediction 10 26 - -
Gso14g0736 496 MobiDBLite consensus disorder prediction 1 26 - -
Gso14g0736 496 CDD Peptidase_C1A 168 382 IPR039417 -
Gso14g0736 496 SMART pept_c1 167 383 IPR000668 GO:0006508|GO:0008234
Gso14g0736 496 Pfam Papain family cysteine protease 167 382 IPR000668 GO:0006508|GO:0008234
Gso14g0736 496 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 325 335 IPR025660 -
Gso14g0736 496 Pfam Cathepsin propeptide inhibitor domain (I29) 79 136 IPR013201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0736 Gso-Chr14 7615700 7620184 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0736 14 7615700 7620184 Gso17g2032 17 39805049 39809347 GST
Gso14g0736 14 7615700 7620184 Gso4g0363 4 3304514 3308234 PCT
Gso4g0363 4 3304514 3308234 Gso14g0736 14 7615700 7620184 PCT