Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0725 ATGGAAGACAGGGATCACTGTTGTTCCAACAATTCAACGATGATCACAACAACAAAGAAAAGAACGGGTAGAAGAAGTCCAACATCGGATAAGCTCAAGAATCAACACCGCGAGAAGCAGTCGATGAAACCTTACCGTGGAATAAGGATGCGGAAGTGGGGGAAGTGGGTGGCGGAGATCAGAGAACCCAACAAAAGGTCGAGGATATGGTTGGGTTCTTACACGACACCCGTGGCCGCCGCACGTGCCTACGACACCGCTGTCTTTTACCTCCGGGGTCCCACCGCGCGCCTTAACTTCCCCGAACTCTTGTTCCAGGACGACGACCAGGAGGGCAGTGATTCGGTGCAGCACGGCGCAGCAGGGAACATGTCCGCTGATTCCATTCGCCGAAAAGCCACGCAAGTCGGCGCCAGAGTCGACGCTCTCCAAACCGCGCTTCACCACCACGCGCCAAGTACCAACTCTCTCAATCTCAAGCCCGACTTGAACGAGTTTCCAAAACTCGAAGAGCTTCAAGATTGA 525 0.541 MEDRDHCCSNNSTMITTTKKRTGRRSPTSDKLKNQHREKQSMKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPTARLNFPELLFQDDDQEGSDSVQHGAAGNMSADSIRRKATQVGARVDALQTALHHHAPSTNSLNLKPDLNEFPKLEELQD* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0725 174 MobiDBLite consensus disorder prediction 23 41 - -
Gso14g0725 174 PRINTS Ethylene responsive element binding protein signature 45 56 IPR001471 GO:0003700|GO:0006355
Gso14g0725 174 PRINTS Ethylene responsive element binding protein signature 83 103 IPR001471 GO:0003700|GO:0006355
Gso14g0725 174 Pfam AP2 domain 45 93 IPR001471 GO:0003700|GO:0006355
Gso14g0725 174 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 4 171 - -
Gso14g0725 174 SUPERFAMILY DNA-binding domain 44 102 IPR016177 GO:0003677
Gso14g0725 174 MobiDBLite consensus disorder prediction 8 22 - -
Gso14g0725 174 CDD AP2 45 103 IPR001471 GO:0003700|GO:0006355
Gso14g0725 174 Gene3D AP2/ERF domain 44 102 IPR036955 GO:0003700|GO:0006355
Gso14g0725 174 MobiDBLite consensus disorder prediction 149 174 - -
Gso14g0725 174 SMART rav1_2 44 107 IPR001471 GO:0003700|GO:0006355
Gso14g0725 174 MobiDBLite consensus disorder prediction 1 41 - -
Gso14g0725 174 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 4 171 - -
Gso14g0725 174 ProSiteProfiles AP2/ERF domain profile. 44 101 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0725 Gso-Chr14 7449675 7450693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0725 39 155 AP2-EREBP Transcription Factor Family AT2G23340 65.812 4.97e-49 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Gso14g0725 AP2 3e-11 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0725 14 7449675 7450693 Gso17g2040 17 39918596 39919624 GST