Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0720 ATGGCTGGAGATATAGGGAGAGCCTTGCCTCCTCCTGATTCAGAAGAATTCTCAACCTTGTTCAACCAACTCCTCCACAATTCTCCCCCACTAGGAATGGACCCCAATCATTCACCTTCTGATTTCACCCCACACAACACCACCATCAACATCAACAGCAACAACAACAACAACACTGTTCCTTCCTCTCCCTCAAATTTCAATTTCTCTGACCCCCATCATTACATCCCTGCCTCTGATGCCACCACCTTCAAGCAACACAACATCAACCACAACAACAATCACACCCCTGATTTCACTTCTTCTCATGTTGAGAGAAGGAGGAGTAGGATTAACGAGAAAATGAAAGCCTTACAGAATTTAATTCCAAATTCCAACAAGACAGACAAAGCTTCAATGCTAGATGAGGCCATAGAATATTTAAAGCAGCTCCAGCTTCAAGTGCAAATGTTAATGATGAGAAATGGTTTGAGCTTGCATCCAATGTCTTTGCCAGGAGGACTAAGACCTATGATAATGCCTCAGACTGGATTGAATCTTGATGGGAGTAATGGATTTCAGAATTCTACCTGTGCAATTGCCTCATCTTCAAATGATGAAAGCTTGGTGCGGCATGCCTTTAGTTTTCCAAAGCAATGCAGCATCTCAAATAAGTCTATTGGTGTACCCTCCGTGAAAAACATAGCAACTTCGGATACCTCATCCACTTTTCATCCCTCTATTAAGGATGCACTCTACGGCAACATGCCACAACCGTTTATGGATACAACAAAGATTGGAAAACCCTCTCCAGACGTGTCTTAA 804 0.4291 MAGDIGRALPPPDSEEFSTLFNQLLHNSPPLGMDPNHSPSDFTPHNTTININSNNNNNTVPSSPSNFNFSDPHHYIPASDATTFKQHNINHNNNHTPDFTSSHVERRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLMMRNGLSLHPMSLPGGLRPMIMPQTGLNLDGSNGFQNSTCAIASSSNDESLVRHAFSFPKQCSISNKSIGVPSVKNIATSDTSSTFHPSIKDALYGNMPQPFMDTTKIGKPSPDVS* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0720 267 MobiDBLite consensus disorder prediction 26 74 - -
Gso14g0720 267 Pfam Helix-loop-helix DNA-binding domain 106 145 IPR011598 GO:0046983
Gso14g0720 267 SMART finulus 102 150 IPR011598 GO:0046983
Gso14g0720 267 CDD bHLH_AtPIF_like 106 157 - -
Gso14g0720 267 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 95 144 IPR011598 GO:0046983
Gso14g0720 267 PANTHER TRANSCRIPTION FACTOR SPATULA 106 243 - -
Gso14g0720 267 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 106 155 IPR036638 GO:0046983
Gso14g0720 267 MobiDBLite consensus disorder prediction 39 72 - -
Gso14g0720 267 Gene3D - 101 160 IPR036638 GO:0046983
Gso14g0720 267 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 106 243 IPR031066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0720 Gso-Chr14 7371698 7375159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0720 105 203 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 64.000 1.31e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gso14g0720 HLH 9.4e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0720 14 7371698 7375159 Gso17g2047 17 39999883 40003519 GST