Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0713 ATGTCTTCTTTTCCGTTATTGTGGGTACTCCTGCTTCTGTGGGTGTGGTCAGAAGCTATTGCTAATGCAAATAATGATTATGAAATAGAAGGCAGCAACATAGAGTGCCCAATATTGAACTCCAAGATTGTTGTGAATATTGGAGCAATCATAGACTTGAGTTCTCGAGTGGGAAAGGAGCAGAAGACAGCAATGGAAGTTGCAATGGAAGATGTAAATCGCCAAAGTTGTTATAAGCTTGCCTTGAACTTCAATAATAATACTCATGGGAACCCATCTCCTACTATATTGGCTGCTGATTTTGCAAACAACAAGGAAGTGCAAGTTGTCATAGGAACAAAACTCGATGCATCAACATTATTCCACTCAATTGATGAAAGCTCCAAAGATGTCCCCATCATATCTCTAACCTCAACAGCTAGTCCAGAAATAACACCAATCCCATTGCCACACTTCATCCAAATGGGCAACGATGTCACCTTCCACATGCACTGCATTGCATCCATCATACACCAATTCAATTGGAGAAAGGTCACAGCAATTTACGAACACAACAACTTCTTTGCCTCTCATTCAGAGATATTAACAAGACTCTCCTATTCTCTCCGTCTAGTTAATGCTGAAATCGATCACTATGTTGCTTTTCCTTCAATAACAACCACTCTTTCAAACCCAATAGAAAGTTACATAGAACAAGAGCTTGTAAGGCTCAAGAACAAGAGCAATAGGGTGTTCTTGATTATTCAATCTTCCTTAGAGTTTGCCACATTGCTATTAGAGAAGGCAAAGCAAATGGGAATTATGGAAGAAGGGTCGGTGTGGATCATCGCTGATGATGTAGCTACTCATCTTGATTCATTGGATTCTTCTGTCATGTTTAACATGCAAGGTGTTGTGGGGTGCAAAACCAACTTCATGGAAATGAGTGAAACGTTCAAACGCTTCAAATTCATGTTTAGGAGAAAGTTTGGATTGGAATACCCTGAAGAAGAAAACTCCCAATTACCAAGTATCTTTGCTCTTAGGGCTTATGATGCTGTTTGGACCATTACTCATGCATTGAAGAAATCACAAGGGAACTTTTCCTTATCAGAAAATATTTTACATAGTAATCATGAGGGTCTTAGTGGGAAGATAAGCTTCAAGGACAAAATGTTATTGGAACCACCAACCTTTAAGATAGTTAATGTTATTGGAAAAGGTTACAAAGAGTTAGCAAATTGGTCACCAGGGTCTGGTTTCAGTGAGAACCTTGTAGAGCATATGGTAGTGAACACAAGAAGAACTAGTAGGGCTGGTTCTGCTAGAGTGCTTTTAGGTTCTGTGGATTGGCCTGGTGGGTTGAAAACAGTCCCAAAAGGTTGGGTTTACAATAGCACTGAAGGAAGACCTTTGAAAATTGGGGTTCCAGCCATTGATCCATGTCCTCAGTTTGTGAATGTGAGCCATGATAAGAGACTGAATGAAACCCAATTCACGGGTTTCTCTATCAATGTCTTTGAATCAGTTGTGAAACGCCTGCCATATCACCTGCCTTTTGTTTTTGTGCCATTCTATGGCTCTTATGATCAAATAGTTGAACAAGTGAACAATAAGGCCCTTGATGCTGCTGTTGGAGATATTCAAGTGGTGGAACATAGATATGCATTTGCCGAATTCTCTCATCCGTATGTTGAATCTGGTATAGCCATGGTGGTGAAAGTAAAGCCAGATAGATCCAAGGAAACCTGGATGTTTATGGATGCTTTCACAAAAGAAATGTGGATGTTGATGGCAGTGATGCACCTGTTCATAGCATTTGTAATCTGGTTCATTGAAGGTGAAAACAATTCAGAGTTGAAGAGTCTCGGGGCCATTCTCTGGTTTTCTGTCACCACATTATTCTTTGTACACAGAGAACCCGTGAAGAGCAACTTGGCTCGAGCTGTGCTAGCACCTTGGTTATTTGCTATTCTCATAGTGACTTCAAGTTTTACAGCGAGTCTTTCATCTATGATGACAGTGTCCCATCTTGAACCATCTGTGCCAGATATACAAACACTGCTGAGGACAAATGCAATCATAGGCTGCAACAAGAACACTTTTTTGGTCCATTACTTAGTTGATGAACTCAAATTCCAGCCAGAGAATATCAGGGTATTTGACTCCATCCATGATTTCCCAAGAGCCTTTGAGAACAAAGAAATTGTGGCTTCTTTTACCATTGCCCCTCATGCTGATGTCTTCCTAGCTACTTATTGCAAGGGCTACATCAAAGCAGGACCTACTTTGAAGCTTGGTGGATTAGGCTTTGCATTCCCAAAAGGCTCAAGTTTAGCAATTGACGTATCTCGAGCAACCCTAAAAGCTATAGAAACTGGAGAAGTGCAAAAATTAGAAGAGAAGATGTTGTCCACAACCAACTGTGGATCTACAAACAGCAAAATACAAAATGAGCAACTAGGCCCTCAACCTTTCTTTGGCCTATTTACCATTTGTGGAGCCATTGGTCTCTTTGGTTTGTTGGTAACCATTGTTCATTTTGTTAAAAGGAATGCACAAACATTTATGAATTACATATCATTGTTACAGTTACAAAGAGCATTGCAGATAATGCAAATAGTCGAGGGAATACACCCCATAACAATGAGCTAG 2634 0.4021 MSSFPLLWVLLLLWVWSEAIANANNDYEIEGSNIECPILNSKIVVNIGAIIDLSSRVGKEQKTAMEVAMEDVNRQSCYKLALNFNNNTHGNPSPTILAADFANNKEVQVVIGTKLDASTLFHSIDESSKDVPIISLTSTASPEITPIPLPHFIQMGNDVTFHMHCIASIIHQFNWRKVTAIYEHNNFFASHSEILTRLSYSLRLVNAEIDHYVAFPSITTTLSNPIESYIEQELVRLKNKSNRVFLIIQSSLEFATLLLEKAKQMGIMEEGSVWIIADDVATHLDSLDSSVMFNMQGVVGCKTNFMEMSETFKRFKFMFRRKFGLEYPEEENSQLPSIFALRAYDAVWTITHALKKSQGNFSLSENILHSNHEGLSGKISFKDKMLLEPPTFKIVNVIGKGYKELANWSPGSGFSENLVEHMVVNTRRTSRAGSARVLLGSVDWPGGLKTVPKGWVYNSTEGRPLKIGVPAIDPCPQFVNVSHDKRLNETQFTGFSINVFESVVKRLPYHLPFVFVPFYGSYDQIVEQVNNKALDAAVGDIQVVEHRYAFAEFSHPYVESGIAMVVKVKPDRSKETWMFMDAFTKEMWMLMAVMHLFIAFVIWFIEGENNSELKSLGAILWFSVTTLFFVHREPVKSNLARAVLAPWLFAILIVTSSFTASLSSMMTVSHLEPSVPDIQTLLRTNAIIGCNKNTFLVHYLVDELKFQPENIRVFDSIHDFPRAFENKEIVASFTIAPHADVFLATYCKGYIKAGPTLKLGGLGFAFPKGSSLAIDVSRATLKAIETGEVQKLEEKMLSTTNCGSTNSKIQNEQLGPQPFFGLFTICGAIGLFGLLVTIVHFVKRNAQTFMNYISLLQLQRALQIMQIVEGIHPITMS* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0713 877 Gene3D - 164 329 - -
Gso14g0713 877 Gene3D - 457 588 - -
Gso14g0713 877 PANTHER GLUTAMATE RECEPTOR 40 853 - -
Gso14g0713 877 Pfam Receptor family ligand binding region 62 398 IPR001828 -
Gso14g0713 877 SMART GluR_14 466 799 IPR001320 GO:0015276|GO:0016020
Gso14g0713 877 SUPERFAMILY Periplasmic binding protein-like I 44 455 IPR028082 -
Gso14g0713 877 SUPERFAMILY Periplasmic binding protein-like II 444 795 - -
Gso14g0713 877 PIRSF IGluLR_plant 1 866 IPR017103 -
Gso14g0713 877 Pfam Ligand-gated ion channel 797 827 IPR001320 GO:0015276|GO:0016020
Gso14g0713 877 CDD PBP1_GABAb_receptor_plant 46 418 IPR044440 -
Gso14g0713 877 Gene3D - 39 163 - -
Gso14g0713 877 CDD GluR_Plant 463 797 - -
Gso14g0713 877 Pfam Bacterial extracellular solute-binding proteins, family 3 489 796 IPR001638 -
Gso14g0713 877 Gene3D - 686 760 - -
Gso14g0713 877 Gene3D - 761 795 - -
Gso14g0713 877 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 40 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0713 Gso-Chr14 7247837 7255679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0713 36 851 Ion Channels AT2G29120 30.536 3.65e-119 383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0713 14 7247837 7255679 Gso17g2053 17 40098126 40100279 GST