Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0712 ATGGATGGTTACGACGCCACCGTCAGGCTCGGCGCCATCAACCTCAAGCACGGTCGCGCCGCCGATTTTGACTCCGCCTCCCCCGACGTATCCGTCTCCTCTCCGGTCACGCGCCAGAAAGCCGCCGCCGCCAAGCAATTCATCGAGAATCACTACAAAAACTATCTCCAAGGATTGCAGGATCGCAAAGACAGACGCAGAGCGCTTCAGAGAAAAGTGCAGGAGTCTCAGATATCGGCTGAAGAGCAGGAGGAAATGATGAGGAACTTGGAGCGCCGAGAAACTGAGTACATGAGGCTTCAGAGACGTAAAATTGGAATGGATGACTTCGAGCAGTTAACGGTGATTGGGAAAGGTGCTTTCGGTGAGGTGAGGTTATGTCGTGCTAAAGGTACGGGAGAGATTTTTGCCATGAAGAAATTGAAGAAGTCAGAGATGCTTAGTCGTGGACAGGTGGAACATGTTCGATCTGAGAGGAACTTGCTGGCAGAGGTTGATAGCAGATGCATAGTCAAACTCCATTATTCATTCCAAGATTCAGATTTCCTATATCTCATCATGGAATATTTACCTGGTGGTGACATTATGACATTGTTAATGAGGGAAGATATTCTTTCTGAAGATGTTGCTCGCTTCTACATTGCTGAAAGCATTCTTGCTATTCACTCAATACATCAACACAACTATGTACATAGGGATATTAAACCAGATAACCTGATACTGGATAAAAATGGCCATTTGAAGCTTTCAGACTTTGGCTTATGTAAGCCTCTTGATGATAAGTATTCATCAATTTTATTGGAAAATGAAGATCTTACTGGTCAAGAATCAACTAGTGAAACTGAAGCATATTCTGTCTCTCCTTGGTTGATGCCAAAGGAGCGATTACAGCAGTGGAAACGTAATCGCCGTGCATTGGCATATTCAACTGTTGGAACTCTTGATTATATGGCACCTGAAGTTTTGCTCAAGAAGGGCTATGGAATAGAATGCGATTGGTGGTCTCTTGGAGCGATCATGTATGAGATGCTTATTGGGTATCCTCCATTTTGTTCCGATGATCCAAGGATGGCCTGCCGTAAGATTGTTAACTGGAAAACATGCCTGAAATTCCCTGACGAACCCAAGATATCAGCTGAAGCAAAGGATCTGATCTGTCGCTTACTATGTGATGTTGACTCAAGACTAGGAACCAGAGGAGTCGAAGAAATAAAGGCTCATCCATGGTTCAAGGGTATTCAGTGGGACATGCTTTATGAATCAGAAGCTGCTTATAAACCTACGGTCACTGGGGACTTGGATACTCAAAATTTTGAGAAGTTTCCTGAAGTCGATGGCCCACCATCTGTAACAGCATCTGTTGGACCTTGGCGGAAGATGCTGACGTCCAAAGATAACAATTTCATAGGATATACTTTTAAGAAGTCAGACATCCTTAAATCACTTGAAAGTTCAGATGCAGATATCAGAGTAAACGGATCATTGAAAACCCCTTCCTTGATTACATTGTTAGGTCAGATTGATTTGCAAGATACTGTCATACCAGAAAGTGAGCAGAAGCCAGAAGCTTGA 1572 0.4383 MDGYDATVRLGAINLKHGRAADFDSASPDVSVSSPVTRQKAAAAKQFIENHYKNYLQGLQDRKDRRRALQRKVQESQISAEEQEEMMRNLERRETEYMRLQRRKIGMDDFEQLTVIGKGAFGEVRLCRAKGTGEIFAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLHYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESILAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLDDKYSSILLENEDLTGQESTSETEAYSVSPWLMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGIECDWWSLGAIMYEMLIGYPPFCSDDPRMACRKIVNWKTCLKFPDEPKISAEAKDLICRLLCDVDSRLGTRGVEEIKAHPWFKGIQWDMLYESEAAYKPTVTGDLDTQNFEKFPEVDGPPSVTASVGPWRKMLTSKDNNFIGYTFKKSDILKSLESSDADIRVNGSLKTPSLITLLGQIDLQDTVIPESEQKPEA* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0712 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Gso14g0712 523 Gene3D Transferase(Phosphotransferase) domain 1 194 261 - -
Gso14g0712 523 Gene3D Phosphorylase Kinase; domain 1 429 439 - -
Gso14g0712 523 Coils Coil 66 103 - -
Gso14g0712 523 ProSitePatterns Protein kinases ATP-binding region signature. 116 139 IPR017441 GO:0005524
Gso14g0712 523 Gene3D Phosphorylase Kinase; domain 1 72 193 - -
Gso14g0712 523 SMART pkinase_C_6 411 475 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gso14g0712 523 PANTHER SERINE/THREONINE-PROTEIN KINASE 23 509 - -
Gso14g0712 523 SMART serkin_6 110 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0712 523 SUPERFAMILY Protein kinase-like (PK-like) 85 462 IPR011009 -
Gso14g0712 523 Pfam Protein kinase domain 110 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0712 523 Pfam Protein kinase C terminal domain 429 473 IPR017892 GO:0004674|GO:0005524|GO:0006468
Gso14g0712 523 ProSiteProfiles AGC-kinase C-terminal domain profile. 411 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gso14g0712 523 CDD STKc_NDR_like 108 474 - -
Gso14g0712 523 ProSiteProfiles Protein kinase domain profile. 110 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso14g0712 523 Gene3D Transferase(Phosphotransferase) domain 1 309 428 - -
Gso14g0712 523 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 23 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0712 Gso-Chr14 7238603 7245550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0712 1 511 AGC Kinase Gene Family AT5G09890 77.821 0.0 834
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Gso14g0712 Pkinase 1.9e-64 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0712 14 7238603 7245550 Gso17g2054 17 40104333 40110878 GST