Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0706 ATGGATGTTTTGAGTCTTCAAAAGTTGGTGAAGACAGCACCATCTAAAGCATTGATCATCAGAATCAACTTGGTCTGTCTTGCCATCTTTCTCGTTGTTTATGCGACCCTTCTTCTCCGTCCATCTTCCTCTGTCTATTTCGAGAATGCAGCCTCCCTTGTCCGGTGCTCCTTGAGCGAGTGCCATCACAAGGGAGAAAAAAGCACAACGATGAAAGCAGTGCTGGAGGAACCACAGCTGAAATCAAGGAGGGCAAAGCAGAACGCGACTAAGATAGAGGTGCCTAGCTTCTTTGGCGAAATGGGGAAAGGAATGAAGATAGGAATGGTGAACATGCAAGAAGATGATGTGAGTGAATGGAGCACCTTTGGAGAAACAAGCCAAGTTTATTTTGAGAGGGTGTCACATTTTTTCAATTGGACAGATTTATTTCCCGAATGGATAGATGAAGAGGAAGAGACCGATGTTCCATCGTGCCCCGAGATACCAATGCCGGAATTTGCAGCATATGAAGGCATGGACGTGATCGTGGCCAAGTTACCTTGCAAGTACCCCGAAGAAGGATGGGGAAGAGACGTTTTAAGGTTACAAGTTCATCTCATTGTGGCAAATTTGGCAGTGAAGAAGGGAAAGAGGGATTGGAATTGGAAGACAAAAGTGGTTTTGTGGAGTAAGTGTAGGCCAATGCTGGAGCTGTTTCGGTGCAACGATTTGGTTAAGCAGGAAAACGAGTGGTGGTATTATGAGGTTGATGTAAAGAGGTTGGAGCAGAAGGTTTCTTTGCCTGTTGGGTCCTGCAATTTGGCTCTGCCTCTGTGGGAACAAGGGATCGACAAGGTGTACGACACATCGAACCTAGAACAAAGCGTTCAAAGCGAAGCACGAGCGAAACGTGAGGCCTATGTAACAGTGCTTCACTCCTCGGAAGGCTACGTGTGCGGCGCAATAACATTAGCACAAACCCTCCTCCAAACCGGAACCAAGCGCGACCTGGTGCTCCTCCTAGACAGCTCCATCTCCGTCGCGAAGCGCCGCGCCCTCGAACTCTCCGGATGGAAGATCCGACTCATCACCCGGATCCGAAACCCGCGCGCCGAGAACGGCACTTACAACGAATATAACTACAGCAAGTTTCGGTTATGGCAGCTAACGGATTATGAGAGAGTGATCTTTATCGATGCCGACATCATCGTCCTCCGCAACCTTGATATTCTCTTCCACTTCCCGCAGATGTCCGCTACGGGGAATGACCAGTCCATCTTCAACTCCGGCATCATGGTCCTCGAACCCTCCAACTGCACCTTCGAGATTCTCATGTCGCGTCGCCACGACGTCGTCTCCTATAACGGTGGCGATCAGGGGTTCCTGAACGAGATCTTCGTGTGGTGGCACAGGCTTCCACGGCGGGTGAACTACTTAAAGAACTTCTGGGCCAACACGACGATAGAGGCGGGTAGGAAGAACGCAATGTTTGCGGCGGAGCCGCCGAAGCTCTACGCGATTCACTACCTAGGGCTGAAGCCATGGCATTGTTACAAGGACTACGACTGCAACTGGGACGTGCAGGATCAGAGGGTGTACGCGAGCGACGTCGCGCATCGACGGTGGTGGAAGGTGCACGATGCCATGGACGAGAACTTGCAGAAGCTGTGTAGGTTGACGAGGCAACGAAGGATGGAGTTGAACTGGGAAAGGAGAAAGGCTGGGAAGTTAGGGTTGCCAGATATGCATTGGAAGATCAATGTCACGGATCCTAGAAGAGCTGGCTCAATGTTGATTGGTTAA 1785 0.5042 MDVLSLQKLVKTAPSKALIIRINLVCLAIFLVVYATLLLRPSSSVYFENAASLVRCSLSECHHKGEKSTTMKAVLEEPQLKSRRAKQNATKIEVPSFFGEMGKGMKIGMVNMQEDDVSEWSTFGETSQVYFERVSHFFNWTDLFPEWIDEEEETDVPSCPEIPMPEFAAYEGMDVIVAKLPCKYPEEGWGRDVLRLQVHLIVANLAVKKGKRDWNWKTKVVLWSKCRPMLELFRCNDLVKQENEWWYYEVDVKRLEQKVSLPVGSCNLALPLWEQGIDKVYDTSNLEQSVQSEARAKREAYVTVLHSSEGYVCGAITLAQTLLQTGTKRDLVLLLDSSISVAKRRALELSGWKIRLITRIRNPRAENGTYNEYNYSKFRLWQLTDYERVIFIDADIIVLRNLDILFHFPQMSATGNDQSIFNSGIMVLEPSNCTFEILMSRRHDVVSYNGGDQGFLNEIFVWWHRLPRRVNYLKNFWANTTIEAGRKNAMFAAEPPKLYAIHYLGLKPWHCYKDYDCNWDVQDQRVYASDVAHRRWWKVHDAMDENLQKLCRLTRQRRMELNWERRKAGKLGLPDMHWKINVTDPRRAGSMLIG* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0706 594 Pfam Glycosyl transferase family 8 305 510 IPR002495 GO:0016757
Gso14g0706 594 SUPERFAMILY Nucleotide-diphospho-sugar transferases 298 548 IPR029044 -
Gso14g0706 594 PANTHER GLYCOGENIN SUBFAMILY MEMBER 7 588 - -
Gso14g0706 594 CDD GT8_Glycogenin 299 543 - -
Gso14g0706 594 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 297 547 IPR029044 -
Gso14g0706 594 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 7 588 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0706 Gso-Chr14 7155908 7166046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0706 71 594 Glycosyltransferase AT4G33330 67.985 0.0 758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0706 14 7155908 7166046 Gso17g2059 17 40171546 40176951 GST
Gso14g0706 14 7155908 7166046 Gso4g0338 4 3040726 3045927 PCT
Gso4g0338 4 3040726 3045927 Gso14g0706 14 7155908 7166046 PCT