Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0680 ATGGCCCTGAACGATTTTTTCGCGGGGGAGATCGCGACGGAGCTTCTGAAAATGCTGATCAGCATCTCCCGCAAGTCCCTCCTCTGCCGCGCCAGCGCCGACCAGCTCATCAGCTACATCCACGACCTCCTCCCCTCCATCGAGGAGATCAAGTACTCCGGCGTCGAGCTTCCTGCACTGCGCCAATCGCAACTCGACCGTCTCTCGGAGATTCTCCGCTCCGGCGTCGAGCTCTCCCACAAGGTCCTCTCCTCCAGCCGCTGGAACGTCTACCGCAACCTCCAGCTCGCCAAGAAAATGGACAAGCTCGAGAAGAACGTCTCCAAGTTCCTGTTGGGTCCCATGCAGGCACACATGTTGGCCGACATACACCACACCCGGTTCGAGATGACCGAGCGGTTCGACCGGGTCGATAACTCGGTTCAAAGATTGGAGAAGTATTTTGGGAATATGAAGATAGGTGTTGGCGGCGGCGGGTGGGTGGAGGAGGCTGTGAGGAGCGTGGACGAGGATGTTGTTGATAGTAGCTCTGCTGTCGGGTTGGGTTTCGGGAAGAATAAGGTTAGGGAGATGGTTGTCGGGAGGGATGATCTTTGGGTTGTCGGGATTTCCGGGATTGGTGGTTCCGGGAAAACCACTCTTGCTAGAGAGCTCTGCAAAGATGACCAAGTTAGATGTTATTTCAGGGATAGGATTTTGTTCCTGACCGTGTCGCAGTCACCGAATGTGGAGCAGCTAAGGACGAATATTTGGGAGTATATTATGGGCAACGAGAGGTTGGATGCAAATTACATGGTTCCCCAATGGATGCCACAGTTTGAGTGCAGAAGCGAAGCTCGAACTCTGATTGTTTTGGATGATGTGTGGACACTCTCCGTGGTGGACCAGCTTGTGTGTAGAATACCAGGTTGCAAGTTTCTTGTGGTGTCAAGGCCTAAATTCCAAACGGTGTTGAGTTATGAAGTGGAATTGCTGAGTGAAGAGGATGCCCTGTCTTTGTTCTGTCACCATGCTTTTGGACAGAAATCAATTCCTTTAGCTGCTAATGAGAATTTGGTCAAGCAGGTTGTGACTGAGTGTGGAAGGCTTCCCTTGGCTCTTAAGGTGATTGGAGCTTCTTTGCGAGATCAAACTGAGATGTTTTGGTTGAGTGTTAAAAACAGGCTATCTCAGGGCCAAAGTATTGGGGAATCCCATGAAATCAATCTGATTGACAGAATGGCAATCAGTATCAATTACCTTCCAGAGAAGATCAAGGAGTGCTACTTGGACCTGTGTTGTTTTCCTGAGGATAAGAAAATCCCCCTTGATGTTCTCATCAATATATGGGTGGAAATCCATGATATTCCTGAAACAGAAGCTTATGCCATTGTGGTAGAGCTCTCCAACAAAAATCTCCTCACCTTAATGAAAGAGGCTCGTGCTGGAGGCATGTATAGCAGTTGCTTTGAGATCTCAGTTACTCAACATGATGTACTGAGAGACCTGGCCCTTAATTTCAGAAACCGTGAGAGCATTGATGAACGCCGGCTATTAGTTATGCCAAAACGGGAGAATGGAATGCCTAAAGAGTGGTTGAGATACAGGCACAAGCCATTTGAGGCTCAGATTGTTTCAATTCACACAGGTGAAATGAAGGAAGTGGACTGGTGTAATCTAGAATTTCCAAAGGCTGAAGTGCTGATCATTAATTTCACATCCACTGAATACTTCTTGCCCCCTTTCATCAATAGAATGCCAAATTTGAGGGCATTGATAATAATAAACTACAGTGCAACATATGCTTGCCTTCACAATGTTTCAGTTTTCAAGAACTTGTCCAACTTAAGGAGCCTCTGGCTTGAAAAAGTTTCCACCCCCGAGTTATCAAGCATTGTCTTGGAAAACTTGGGAAAATTATTTATTGTCCTGTGCAAGGTTAATGACAGTTTGGTGGAAAAAGAAGTAGACTTGGCTCAAGTCTTCCCTAATCTCTTTGAGCTCACTCTTGATCACTGTGATGATCTAACCCAATTGCCCTCAAGCATTTGTGGGATGAAGTCACTCCAGAACTTGAGTCTCACCAACTGCCACAATTTGACTGAATTACCAGTTGAACTAGGGAAACTAAGATCTCTAGAGATCCTACGTTTATATGCTTGTCCTTATCTGAAAACACTTCCTAATAGCATCTGTGACATGATGAGATTGAAGTATATTGACATTTCTCAATGTGTTAACTTGACATGCTTCCCTGAAAAGATTGGTAGATTGGTAAGCTTGGAGAAGATTGACATGAGGGAATGCTCCATGATTAGAAATGTGCCAAAGTCTGCAGTGTCATTGCAATCTCTGAGGCTTGTAATTTGTGATGAGGAGGTATCTGGGATTTGGAAAGAGGTTGCCAAGCCTGATAATGTGCATATTCAAGTATCAGAGCAATACTTTGATTTGGACTGGCTCAAAGAGTGA 2451 0.4602 MALNDFFAGEIATELLKMLISISRKSLLCRASADQLISYIHDLLPSIEEIKYSGVELPALRQSQLDRLSEILRSGVELSHKVLSSSRWNVYRNLQLAKKMDKLEKNVSKFLLGPMQAHMLADIHHTRFEMTERFDRVDNSVQRLEKYFGNMKIGVGGGGWVEEAVRSVDEDVVDSSSAVGLGFGKNKVREMVVGRDDLWVVGISGIGGSGKTTLARELCKDDQVRCYFRDRILFLTVSQSPNVEQLRTNIWEYIMGNERLDANYMVPQWMPQFECRSEARTLIVLDDVWTLSVVDQLVCRIPGCKFLVVSRPKFQTVLSYEVELLSEEDALSLFCHHAFGQKSIPLAANENLVKQVVTECGRLPLALKVIGASLRDQTEMFWLSVKNRLSQGQSIGESHEINLIDRMAISINYLPEKIKECYLDLCCFPEDKKIPLDVLINIWVEIHDIPETEAYAIVVELSNKNLLTLMKEARAGGMYSSCFEISVTQHDVLRDLALNFRNRESIDERRLLVMPKRENGMPKEWLRYRHKPFEAQIVSIHTGEMKEVDWCNLEFPKAEVLIINFTSTEYFLPPFINRMPNLRALIIINYSATYACLHNVSVFKNLSNLRSLWLEKVSTPELSSIVLENLGKLFIVLCKVNDSLVEKEVDLAQVFPNLFELTLDHCDDLTQLPSSICGMKSLQNLSLTNCHNLTELPVELGKLRSLEILRLYACPYLKTLPNSICDMMRLKYIDISQCVNLTCFPEKIGRLVSLEKIDMRECSMIRNVPKSAVSLQSLRLVICDEEVSGIWKEVAKPDNVHIQVSEQYFDLDWLKE* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0680 816 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 135 IPR008808 -
Gso14g0680 816 PRINTS Disease resistance protein signature 200 215 - -
Gso14g0680 816 PRINTS Disease resistance protein signature 275 289 - -
Gso14g0680 816 PRINTS Disease resistance protein signature 360 374 - -
Gso14g0680 816 PRINTS Disease resistance protein signature 677 693 - -
Gso14g0680 816 Pfam NB-ARC domain 186 405 IPR002182 GO:0043531
Gso14g0680 816 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Gso14g0680 816 Gene3D - 406 496 IPR036388 -
Gso14g0680 816 Gene3D - 324 405 IPR042197 -
Gso14g0680 816 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 3 813 - -
Gso14g0680 816 Gene3D Ribonuclease Inhibitor 523 798 IPR032675 -
Gso14g0680 816 Gene3D - 173 319 IPR027417 -
Gso14g0680 816 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 813 IPR044974 GO:0006952
Gso14g0680 816 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 425 IPR027417 -
Gso14g0680 816 SUPERFAMILY RNI-like 552 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0680 Gso-Chr14 6833871 6837604 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0680 671 794 Receptor kinase-like Gene Family AT5G27060 28.800 9.78e-09 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0680 14 6833871 6837604 Gso17g2080 17 40446815 40450690 GST