Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0672 ATGGGTTGTGACTGTGGGGGAAAGTTAAATGTGAGAAAGCCTCATTTCTATGAGGTTTATTCTTCTGCCTTCAGCTCTCACAGACTGAGACTTCCCGATGGATTTGTCTGTTGTATGGAGGGAAGGGCATATGGATCAGTTTCGTTGACTGGTCCTAGTGGAAACATATGGACTGTGCAATTGATTAAGCAAGACAATGATCTATTTTTCCATCATGGATGGTCGACATTTGTGGTGGATCATCGACTAGAATGTGGTGAACTTTTGGTTTTCAGATATGAGGGTCACTTGCATTTTACCGTGCAAATATTTGATAAGGATGCATGTGAGAAAGAGGCAGCGTTTCATTCTGAATGCAGTCAAAGTTCAAGCGACTTTGATAATATTAAAGGGCAGAAAAGAGATCGAAAGGAGAATTCTTCTTTGCATATTGTTGTTGATGGTGTTCCAAAGAAAATGAGAGGCAGTACCAATGAGAACCAGGAACTTGAACTGGGTGTTGGTAAAGAACTACTGCTGTATGACGTTGTAAGACCAATTAGTATGTTCAGAGAAAATGAAGAAACCTCCAAAACATGTTCAGCTAATGATGTCCCTGTGCCTTTTCACATGGAAAATAGCAATGAAGATGAAGAGGCTGACATCCTGTATAGAAGTGGGAACGACGATCATCATTATATTCTCAGTGGAGTTTCATTATCAAATGTATCAGCACACGATGAGAAAAAAGTTGCCCAGTCATTTATTTCCTCTTTTCCATATTTTGTTAGAATCATGAAAAGCTTCAATGTCAGTGGTTCATATACTCTGAATATCCCATATCAGTTTTCGATGGCACATCTTCCCAATTGCAAGATAAAGATTATTCTTCATAATTTGAAAGGAGAACATTGGACTGTTAATTCTGTGCCAACAACTAGGGTGCATACTAGTCATACTCTTTGTGGAGGATGGATGGCCTTTATTCGTGGTAATAACATAAAGGTTGGAGATATCTGTATTTTTGAGCTTGTGCGTGAGTGTGAATTACGTGTTCGCATTGCTGAGGTGGGAAAAGATGGGCGAGATTGCCAGGTTGGAAACGTAGCCATGACTAGGCCTAGTGCAGGACATGCTGTAAGTTCCAAATGTATGTCAATGAATCCTAAAGTCAACTCGAAATGCATAAGAAAAGTTGATCTATCAGATAAGAAGTGGTCAAAGATTGGTCAAGAAACTATTTTATCCATTGACTTAAAGAAATCTAGTAGAGCTTCAAATACTTCTAAGAAGATGGGGCTTTGCCCTCAGTCGAAAGCTGCCCATAAAAAGTTGGCTGCTCCAAGGAGACATCGTGTTGAAGATGAGCTAAGCTCACAGGCTAAAGCTGGTTTGAGAATGTTGTTTGCACTTGATGAACAAAGAGTAGCTCAAGCTTTTAGTTCCCCTTTTCCTAGTTTTGTGAAAATAATGAAAAAGTTTAATGTCAGTGGATCATACACTTTGTTCTCAGCTGCACATCTCCCAACTTACAAAACTGAAGTTACACTTCGTAATTCAAGAGGTGGATGTTGGACTGTGAACTCGGTCCCAGATGCAAAAGGCCGAACAGTTCACACCTTTTGTGGGGGATGGATGGCCTTTGTTCGTGACAATGACATCAATTTTGGAGACACATGCATTTTTGAACTTGTTGCTCAGTGTGAGATGCAGGTTTACATATCTGGGGTTGGAAAGGAAGGGCTTGACCATCAAAATGGCCATTTAAAACTTACTAATAGATTAGCTAACGTTCCATCTACCTGCTAA 1788 0.3993 MGCDCGGKLNVRKPHFYEVYSSAFSSHRLRLPDGFVCCMEGRAYGSVSLTGPSGNIWTVQLIKQDNDLFFHHGWSTFVVDHRLECGELLVFRYEGHLHFTVQIFDKDACEKEAAFHSECSQSSSDFDNIKGQKRDRKENSSLHIVVDGVPKKMRGSTNENQELELGVGKELLLYDVVRPISMFRENEETSKTCSANDVPVPFHMENSNEDEEADILYRSGNDDHHYILSGVSLSNVSAHDEKKVAQSFISSFPYFVRIMKSFNVSGSYTLNIPYQFSMAHLPNCKIKIILHNLKGEHWTVNSVPTTRVHTSHTLCGGWMAFIRGNNIKVGDICIFELVRECELRVRIAEVGKDGRDCQVGNVAMTRPSAGHAVSSKCMSMNPKVNSKCIRKVDLSDKKWSKIGQETILSIDLKKSSRASNTSKKMGLCPQSKAAHKKLAAPRRHRVEDELSSQAKAGLRMLFALDEQRVAQAFSSPFPSFVKIMKKFNVSGSYTLFSAAHLPTYKTEVTLRNSRGGCWTVNSVPDAKGRTVHTFCGGWMAFVRDNDINFGDTCIFELVAQCEMQVYISGVGKEGLDHQNGHLKLTNRLANVPSTC* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0672 595 Gene3D - 8 109 IPR015300 -
Gso14g0672 595 CDD B3_DNA 253 347 IPR003340 GO:0003677
Gso14g0672 595 ProSiteProfiles B3 DNA-binding domain profile. 507 571 IPR003340 GO:0003677
Gso14g0672 595 SMART B3_2 480 571 IPR003340 GO:0003677
Gso14g0672 595 SMART B3_2 16 107 IPR003340 GO:0003677
Gso14g0672 595 SMART B3_2 255 351 IPR003340 GO:0003677
Gso14g0672 595 CDD B3_DNA 21 105 IPR003340 GO:0003677
Gso14g0672 595 ProSiteProfiles B3 DNA-binding domain profile. 14 107 IPR003340 GO:0003677
Gso14g0672 595 ProSiteProfiles B3 DNA-binding domain profile. 255 351 IPR003340 GO:0003677
Gso14g0672 595 Pfam B3 DNA binding domain 21 106 IPR003340 GO:0003677
Gso14g0672 595 Pfam B3 DNA binding domain 255 347 IPR003340 GO:0003677
Gso14g0672 595 Pfam B3 DNA binding domain 501 562 IPR003340 GO:0003677
Gso14g0672 595 Gene3D - 236 351 IPR015300 -
Gso14g0672 595 Gene3D - 465 570 IPR015300 -
Gso14g0672 595 CDD B3_DNA 478 567 IPR003340 GO:0003677
Gso14g0672 595 SUPERFAMILY DNA-binding pseudobarrel domain 473 569 IPR015300 -
Gso14g0672 595 PANTHER B3 DNA-BINDING DOMAIN PROTEIN 455 590 - -
Gso14g0672 595 PANTHER B3 DNA-BINDING DOMAIN PROTEIN 1 455 - -
Gso14g0672 595 PANTHER B3 DOMAIN-CONTAINING 1 455 - -
Gso14g0672 595 PANTHER B3 DOMAIN-CONTAINING 455 590 - -
Gso14g0672 595 SUPERFAMILY DNA-binding pseudobarrel domain 10 109 IPR015300 -
Gso14g0672 595 SUPERFAMILY DNA-binding pseudobarrel domain 250 348 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0672 Gso-Chr14 6752614 6757135 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gso14g0672 B3 2.9e-11 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0672 14 6752614 6757135 Gso17g2084 17 40488191 40492008 GST