Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0671 ATGGTTGGTCAAAATTGTGATGGTTGCAGATCCTGGGAAGAGGACATTTACTGGTCCCATTTTCAATTCCTGCATTTCGTGCAGTTTCTCCATGCCGATTATGATCAACACCTTGCACTTCCGAAAACATTTTCGGATAATTTAAAGAAGAAGTTGCCGGAAAATGTGACCCTTAAGGGTCCTGGTGGTGTTATGTGGAATATAGGGATGACTACTAGAGATGATACCTTGTACTTCGGGCATGGTTGGGAACAATTTGTGAAAGACCACTGTTTGAAAGAGAACGATTTCCTGGTCTTTAAGTACAATGGTGAATCTCAGTTTGATGTTTTAATATTCAATGGGTGGAGCTTGTGTGAGAAGGCGGGTTCTTATTTTGTTAGAAAATGTGGGCACACTGAAATTGACCATGCAGGTGGAAGTCTCAACAAGAAAAGGGACACAGATAATGATTCTTTGGAAGAAGGCAATATCCCTTCAAATGCTGGTGTGGAATGTGCTTTGCACGAGAAATCTGCACATGTTAATGGAACAAAGGAACCAATAGATGTACCTCCTGAAACTCCTCCTACTGAAAATACTTTCAATGCTGGTGTTGAATCTTCTGGTGTGGAGCAATTCACACCTGATGGAGGAGTCACTCTGGCAGCTGTTCCCTCCGAAACTGCTAATGGGAAAAGGATCAGGAACATTGTTTCTGCTGTTAAGCATGTCCATACCAAGCGGAAGGGAAGACCAGCTAAATGGCATGTTCGTGAGAGAACACTTGACTGGGTGGCTGCACTAGAAGCTGAACCTGTTTCTGCATCTAGAAGTGGGACATATGAGGTATACAAATCAAATAGAAGGCCTGTCACAGATGATGAGACTAGAAAGATTGAGTCATTGGCCAAGGCAGCATGCACCGATGACAGTATATATGTAGTCATGAAACCCACGCATGTGTACAAGAGATTCTTCGTGTCAATAAGGGGTACATGGATAGGAAAACATATCTCTCCATCATCTCAAGATGTGATATTGCGCATGGGTAAGGGTGAATGGATTGCCAGATACAGCTACAATAATATTCGTAACAATGGAGGACTCACTGGTGGGTGGAAACATTTTTCTTTGGATAGCAACCTTGAAGAGGGTGATGCCTGTGTGTTTAAACCAGCTGGCCAAATAAACAACACTTTTGTCATTGATATGAGCATTTTCAGAGTTGTTCCGGAGACTGTTCCTCTCACTCCGATGTCTCGTGGAACTAGAACTGGAACAAGAACTGGAACTGGAAGAAGGGGTAGGAAGCCAGCAACCATGAAGTCTATTCAGACACAACTTAGTTCACCATGA 1338 0.4297 MVGQNCDGCRSWEEDIYWSHFQFLHFVQFLHADYDQHLALPKTFSDNLKKKLPENVTLKGPGGVMWNIGMTTRDDTLYFGHGWEQFVKDHCLKENDFLVFKYNGESQFDVLIFNGWSLCEKAGSYFVRKCGHTEIDHAGGSLNKKRDTDNDSLEEGNIPSNAGVECALHEKSAHVNGTKEPIDVPPETPPTENTFNAGVESSGVEQFTPDGGVTLAAVPSETANGKRIRNIVSAVKHVHTKRKGRPAKWHVRERTLDWVAALEAEPVSASRSGTYEVYKSNRRPVTDDETRKIESLAKAACTDDSIYVVMKPTHVYKRFFVSIRGTWIGKHISPSSQDVILRMGKGEWIARYSYNNIRNNGGLTGGWKHFSLDSNLEEGDACVFKPAGQINNTFVIDMSIFRVVPETVPLTPMSRGTRTGTRTGTGRRGRKPATMKSIQTQLSSP* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0671 445 CDD B3_DNA 25 114 IPR003340 GO:0003677
Gso14g0671 445 CDD B3_DNA 309 402 IPR003340 GO:0003677
Gso14g0671 445 MobiDBLite consensus disorder prediction 411 445 - -
Gso14g0671 445 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 259 414 IPR044837 -
Gso14g0671 445 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 5 156 IPR044837 -
Gso14g0671 445 Gene3D - 285 404 IPR015300 -
Gso14g0671 445 ProSiteProfiles B3 DNA-binding domain profile. 23 116 IPR003340 GO:0003677
Gso14g0671 445 Pfam B3 DNA binding domain 309 389 IPR003340 GO:0003677
Gso14g0671 445 Pfam B3 DNA binding domain 35 113 IPR003340 GO:0003677
Gso14g0671 445 ProSiteProfiles B3 DNA-binding domain profile. 347 404 IPR003340 GO:0003677
Gso14g0671 445 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 5 156 - -
Gso14g0671 445 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 259 414 - -
Gso14g0671 445 SUPERFAMILY DNA-binding pseudobarrel domain 21 114 IPR015300 -
Gso14g0671 445 SUPERFAMILY DNA-binding pseudobarrel domain 306 391 IPR015300 -
Gso14g0671 445 SMART B3_2 306 404 IPR003340 GO:0003677
Gso14g0671 445 SMART B3_2 26 116 IPR003340 GO:0003677
Gso14g0671 445 Gene3D - 19 117 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0671 Gso-Chr14 6741222 6744960 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gso14g0671 B3 5.3e-09 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0671 14 6741222 6744960 Gso17g2085 17 40496672 40500439 GST