Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0670 ATGTTCACTAATTCACACACGGTAATGCAAACCTTACTGTCTCCTTTGGCGGAGCCTGACCTCTCCTTGAACATAAGCCCTCCCTCTATCTCAGATTCTGAAGCCGCCAAAGATGTTGGAAGCTTTGGAAAAGTGCTTTACAGTGATATTTGTTCAACTTCTGATTCTGGTAGTAGTGGAGGAAGTGATTTGAGCCACGAGTTCCACAACCTTGGTCATCATCATCATCGTGAGCCCACATTGAAGTTAGGATTCGGAACTGTGGATTTGAATCCGCACCATCATCAAGTACAAGGTGTTCCAAGAAGCTTCATTCACCACCACCTCCAACCTCACATCTATGGCCGCGATTTCAAACGAAGCGCAAGAGTCGTTCATGGTGTCAAAAGAAGCGTCAGGGCTCCTAGGATGAGATGGACCACCACCCTCCATGCCCATTTTGTTCACGCGGTTCAACTTCTTGGCGGCCACGAAAGAGCAACTCCGAAGTCTGTTTTAGAGTTAATGAATGTTAAGGATCTAACCCTAGCACATGTCAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCACTGACAAAGGCATCACTGCTGCAGGTCATGGGCAGACAGGTATTGGATTAATGAACCCAAGGCCAGGCATTAATGTTCATCTGCATGCACTCTCACCTATTTGTGACACAACCAATTTACCAGACCCCATTCAAAGTTCACACAGGACACCGTGGCAATCATCGATAGAGACAAAAACAAACAATAGAAGACAAGAAGAACCCGAAATCGGTTTGACGTATTCTCACCTCAAGGGAAATAATAATAATAATGAAACCACGGTGGATGGGCACAACAATTATGGAGGGTTGGATTCTACCCCTTTGTCACGTTCCGAGGAGGCAATGCTTGACCTTGAATTCACCCTTGGAAGACCCAATTGGCAGAAAGACCACACTGAATCATCAAGAGAGTTAACTCTTCTCAAGTGTTGA 987 0.4539 MFTNSHTVMQTLLSPLAEPDLSLNISPPSISDSEAAKDVGSFGKVLYSDICSTSDSGSSGGSDLSHEFHNLGHHHHREPTLKLGFGTVDLNPHHHQVQGVPRSFIHHHLQPHIYGRDFKRSARVVHGVKRSVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKGITAAGHGQTGIGLMNPRPGINVHLHALSPICDTTNLPDPIQSSHRTPWQSSIETKTNNRRQEEPEIGLTYSHLKGNNNNNETTVDGHNNYGGLDSTPLSRSEEAMLDLEFTLGRPNWQKDHTESSRELTLLKC* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0670 328 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 328 - -
Gso14g0670 328 MobiDBLite consensus disorder prediction 236 259 - -
Gso14g0670 328 Pfam Myb-like DNA-binding domain 136 187 IPR001005 -
Gso14g0670 328 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 328 IPR044847 GO:0000976|GO:0006355|GO:0010158
Gso14g0670 328 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 135 188 IPR006447 GO:0003677
Gso14g0670 328 MobiDBLite consensus disorder prediction 236 250 - -
Gso14g0670 328 Gene3D - 134 191 - -
Gso14g0670 328 SUPERFAMILY Homeodomain-like 132 189 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0670 Gso-Chr14 6713593 6718589 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso14g0670 Myb_DNA-binding 1.4e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0670 14 6713593 6718589 Gso17g2086 17 40515902 40520927 GST
Gso14g0670 14 6713593 6718589 Gso4g0312 4 2812832 2816421 PCT
Gso14g0670 14 6713593 6718589 Gso6g0294 6 2738092 2741138 PCT
Gso4g0312 4 2812832 2816421 Gso14g0670 14 6713593 6718589 PCT
Gso6g0294 6 2738092 2741138 Gso14g0670 14 6713593 6718589 PCT