Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0637 ATGTCGATATCAATATCGTTATCCTCAGTCCCCGCGCGTCTCACACTCCTCGCTGTCTTCTCCGCCACCACCTTCTACTGCCTCTACAAATATCACCGCCTAAGACACCTTAAACTCTTTCTAAACCCTAACCCTAACCCTAACCCTAAGATTATCTTCGTCTCCGAAACCGGAACCTCCAAAACCCTCGCGCGTCGCCTTCACGGCCTCCTCGCCTCCAATGACGTCGCATTCGACCTCGTCGATGCGCAGCACTACGAGCCCGAGGACCTCCCCAAGGAGACGCTCATCATCCTCGTCGCATCCACGTGGCTGGATGGCGCTCCCTCCGCCGCCTCCCGCTTCTTCGCCACCTGGCTCGCCGACGCGGCCGCCGACTTCCGCGCCGGCTCCCTCCTCCTCTCCCGCTGCCGCTTCGCCGTCTTTGGCGTCGGGAGCCGGGCCTACGGCGACTCCTTCAACGCCGTCGCGAGGGGCCTCGCGAAGCACCTGAGGGCGCTCGGCGCGGCGGAAGTCGTTCCCCTGTTCGAAGGGGACGTCGACGGCGGTGACGTGGATGCGGTTTTCGATCGGTGGTGTGAGAAGGTTGTGGCGGTTTTGAAAAGTGGTAGTGTTGTGGAAAGCTGTGATAATGATGGTGCTGAGGAATCTGGCGTCGTTTCGAGTTCTGAAGATGAGTCTGATGTGGATAGTAGTGAGATTGTTGATCTTGAGGACATTGCTGGTAAAGCTCCGTCGTGGAGGAAGGCGGTGGCTAATGGGGAAGAGAGCAATGAGAAATTGAATGGCAGAAGAGAAATGGTTACTCCGGTGATTCGAGCAAATTTAGAGAAGCAGGGGTATAAAATTATTGGGTCGCATAGTGGTGTCAAGCTTTGTAGATGGACCAAGGCACAGCTTAGAGGTCGAGGTGGTTGCTATAAGCACTCGTTTTATGGAATTGAGAGTCACAGATGCATGGAGGCAACCCCTAGCTTGGCATGTGCTAATAAATGTGTTTTCTGCTGGAGGCATCACACAAATCCAGTAGGGAAAAGTTGGCAGTGGCAGATGGATGATCCAATAGAGATTGTAAATTCTGCAATAGACCTGCATACAAATATGATTAAACAAATGAAAGGAGTTCCTGGAGTCACCTTGGAGCGATTATCTGAAGGCCTCTCACCACGTCATTGTGCATTATCTCTTGTTGGTGAACCTATTATGTATCCAGGGATAAATGCACTTGTGGATGAGCTGCACAAAAGGAGGATTTCCACTTTTCTAGTTACAAATGCACAATTTCCAGAGAAAATTAAGTCACTGAAACCTGTCACCCAGTTATATGTAAGTGTAGATGCTGCAACAAAGGACTCTTTGAAGGCAATTGATAGACCACTCTTCGGAGATTTCTGGGAGCGATTCATTGATTCCTTGACTGCTCTAAAGGAAAAACATCAGCGAACTGTATACCGTCTGACCCTGGTGAAAGGCTGGAATACCGCAGACATTGATGCTTATTCTAAGCTCTTTAGTTTAGGAGAACCTGACTTTGTTGAAATCAAGGGAGTTACATATTGTGGCTCGTCCACTACATCAAAATTGACAATGGATAATGTCCCTTGGCATGCTGATGTGAAAGCTTTTTCTGAGGCCCTAGCTTTGAAAAGCCAAGGAGAGTATGAAGTCGCGTGTGAGCATGCTCACTCATGCTGTGTCCTCTTAGCAAAAACTAATAAGTTCAAAATTGATGGTCAGTGGTATACATGGATAGACTATGAAAAATTTCATGATCTGGTGGCATCTGGAAGATCTTTTGACAGCAGAGATTACATGGCTGCCACACCATCGTGGTCTGTTTATGGATCAGAGGAAGGTGGATTTGATCCAGGACAATTGAGATATAGGAAAGAGAGACATCACAAGTCAACCCGCAATCAAGCAGGTTAG 1929 0.4904 MSISISLSSVPARLTLLAVFSATTFYCLYKYHRLRHLKLFLNPNPNPNPKIIFVSETGTSKTLARRLHGLLASNDVAFDLVDAQHYEPEDLPKETLIILVASTWLDGAPSAASRFFATWLADAAADFRAGSLLLSRCRFAVFGVGSRAYGDSFNAVARGLAKHLRALGAAEVVPLFEGDVDGGDVDAVFDRWCEKVVAVLKSGSVVESCDNDGAEESGVVSSSEDESDVDSSEIVDLEDIAGKAPSWRKAVANGEESNEKLNGRREMVTPVIRANLEKQGYKIIGSHSGVKLCRWTKAQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGKSWQWQMDDPIEIVNSAIDLHTNMIKQMKGVPGVTLERLSEGLSPRHCALSLVGEPIMYPGINALVDELHKRRISTFLVTNAQFPEKIKSLKPVTQLYVSVDAATKDSLKAIDRPLFGDFWERFIDSLTALKEKHQRTVYRLTLVKGWNTADIDAYSKLFSLGEPDFVEIKGVTYCGSSTTSKLTMDNVPWHADVKAFSEALALKSQGEYEVACEHAHSCCVLLAKTNKFKIDGQWYTWIDYEKFHDLVASGRSFDSRDYMAATPSWSVYGSEEGGFDPGQLRYRKERHHKSTRNQAG* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0637 642 Gene3D - 35 211 IPR029039 -
Gso14g0637 642 SFLD tRNA wybutosine-synthesizing 263 574 IPR034556 GO:0008033|GO:0051539
Gso14g0637 642 MobiDBLite consensus disorder prediction 619 642 - -
Gso14g0637 642 PRINTS Flavodoxin signature 50 63 IPR001094 GO:0010181
Gso14g0637 642 PRINTS Flavodoxin signature 98 109 IPR001094 GO:0010181
Gso14g0637 642 PRINTS Flavodoxin signature 136 146 IPR001094 GO:0010181
Gso14g0637 642 PRINTS Flavodoxin signature 161 180 IPR001094 GO:0010181
Gso14g0637 642 Gene3D Aldolase class I 251 582 IPR013785 -
Gso14g0637 642 CDD Radical_SAM 324 517 - -
Gso14g0637 642 ProSiteProfiles Radical SAM core domain profile. 312 555 IPR007197 GO:0003824|GO:0051536
Gso14g0637 642 Pfam Radical SAM superfamily 324 502 IPR007197 GO:0003824|GO:0051536
Gso14g0637 642 SUPERFAMILY Radical SAM enzymes 325 505 - -
Gso14g0637 642 SFLD tRNA wybutosine-synthesizing 263 574 - -
Gso14g0637 642 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 8 636 IPR034556 GO:0008033|GO:0051539
Gso14g0637 642 SUPERFAMILY Flavoproteins 48 200 IPR029039 -
Gso14g0637 642 Pfam Wyosine base formation 507 570 IPR013917 -
Gso14g0637 642 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 8 636 - -
Gso14g0637 642 ProSiteProfiles Flavodoxin-like domain profile. 49 197 IPR008254 GO:0010181
Gso14g0637 642 MobiDBLite consensus disorder prediction 209 228 - -
Gso14g0637 642 Pfam Flavodoxin 51 191 IPR008254 GO:0010181
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0637 Gso-Chr14 6258323 6264522 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0637 14 6258323 6264522 Gso17g2118 17 40890775 40897427 GST