Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0628 ATGAGCTGGAGAACCCTAGCTTCCACTTCAAGACACACTTTCAAGAGACTCAATGCAATCCTACGATCTCCTTCCACCACCTTCCCTTCTTCACGTGCCTCTCCCTCCCTCTTCCACCACGCGCCGTTCTCCACCACCACCCTCCGTTCCCCCCAACCCACCAACGCCCTCATCGACCCTAAACTCCTCTCTCCGCATAACGACGCCGACGACGACGAAACCACGAACGAGTTCCTCTCCCGATTCGTATGGATAATGCGTAAGAAGGTGAATGAAGCGTACCCTGACTCCGACAAGCCCGCTGTCGACGGCATGCTCTTCGCCATCGTCGAGAGGTTCGTTTCCGAAATGGAAAAGGGCGGCATCGAAACGATGTCGTCGTTTCGTTCGGCTGATTTCAGCGAGGATTTGTGGAGAACGGTGTGGGAGGTGAGCAATTTGGTGCTGGAGGACATGGACAAGGAGATAAAAAAAGAGAAAATGAAGGGCTTCTTGCAGTGTGAAGAAGTCAAGGAGATGTGCAGATTCGCCGGAGAAGTCGGCATTCGCGGCGATTTGCTCAGGGAACTTAGGTTTAAGTGGGCGCGTGAGAAGTTGGAGGAGCATGAATTCTATGAGGGTTTGGAGAGATTGAGGAAAGAGACACAAAGTGAGGGCAATGCAATTGATGTTCCTAAGGAGGAGAAGGAGAAGGTTGTTGTTGGACTTCCCAAGAGGAGAGGGAAGATAAGGTACAAGATTTACGGGCTCGATCTCTCGGATCCCAAGTGGGCACAAGTTGCTGATAGGATCCATGAGGCAGAGCAGGTGTTTTGGCCGCAGGAGCCAAAACCGATCACTGGGAAAGCGAAAATTGTTACCACGAAGATTCTGTTGTCGAAGGAGGAGGAGGAGGAGGAGGAGGATGGTTTGCAAAGCCTGTTGGCTGAGTGGGTGGAGCTTGTGCAACCTAGCAGGGTGGAATGGATGGATTTGCTCGACAAATTAAAAGAGCATAATCCTGGTTTGTACTTTAAGGTGGCTGAAATGGTATTGACTGAAGATTCTTTCCAAACACATGTATCTGACTACTCTAGGCTTATTGATATCTATGCTAAAGAGAATCGCTTTGATGATGTTGAGAGAATGTTAAAGAAGCTGAATGAAAATGGTCTACAAGTAGATGCTTCAATAGCCAGTACTTTGGTCCTCATGTACTGCAAGAGAGGTGATCTTGCCCATGCAAAAGAAGCATTTGAAGTCTTGACGAGCCTGGGCTTCCAACCAGACGCACATGTCTACAACTCAATGATCACAGCCTTGGTGAATAATGGCCAGCCTAAGTTGGGTGAGAAATTGATGAGGGACATGGATGATAGACATATTCCAATCACAAAGGACATATACATGGCATTGCTCCGTTCTTTTTCTCAACTTGGTGATGCTGTAGGAGCTGAACGAATTTCAAACACTATGCAATTTGCAGGAATCCAGCAGGGTATGGATATGGAGACATCCACCCTGCTTATTGAGGCAAGTGCACTTGCTGTTCCTTGTAACCCTGATCAGGCAAGAAGCCATTTTGACTACATGATAAAATTGGGGCATAAGCCTGATGATAGGTGCACCGCTAGCATGATTTCAGCTTATGAGAAGAAAAACTACTTGGACAATGCTTTAAATCTTCTATTGGAATTAGAGAAGGATGGGTTTGAGCCTGGGGTTGCCACTTATTCTGTTCTTGTGGACTGGTTGGGTAAGTTGCAGCTTGTTGACGAGGCAGAGCAGCTTTTAGGCAAAATAGCTCTGCTGGGCGAGGCTCCTCCCTTTAAGCTTCAAGTGAGTCTTTGTGATATGTATGCAAGGGCTGGAAATGAGAAAAAGGCCCTTCAAAGCCTAGGTGTTCTGGAAGCTAGGAAGGATGAATTAGGTCAAGCTGAGTTTGAGAGAATTTTAAGTGGCCTTATTGATGGTGGGTTTCAGAAGGATGCACAAAGAATAAGTCAGATCATGGAGGCACAGGGTTTTGATGCATCAAGGGTTAAGTTTAAACTTTCAAAACCTGTCTCAAGAGCACCGAGTTTTAGATGA 2070 0.4705 MSWRTLASTSRHTFKRLNAILRSPSTTFPSSRASPSLFHHAPFSTTTLRSPQPTNALIDPKLLSPHNDADDDETTNEFLSRFVWIMRKKVNEAYPDSDKPAVDGMLFAIVERFVSEMEKGGIETMSSFRSADFSEDLWRTVWEVSNLVLEDMDKEIKKEKMKGFLQCEEVKEMCRFAGEVGIRGDLLRELRFKWAREKLEEHEFYEGLERLRKETQSEGNAIDVPKEEKEKVVVGLPKRRGKIRYKIYGLDLSDPKWAQVADRIHEAEQVFWPQEPKPITGKAKIVTTKILLSKEEEEEEEDGLQSLLAEWVELVQPSRVEWMDLLDKLKEHNPGLYFKVAEMVLTEDSFQTHVSDYSRLIDIYAKENRFDDVERMLKKLNENGLQVDASIASTLVLMYCKRGDLAHAKEAFEVLTSLGFQPDAHVYNSMITALVNNGQPKLGEKLMRDMDDRHIPITKDIYMALLRSFSQLGDAVGAERISNTMQFAGIQQGMDMETSTLLIEASALAVPCNPDQARSHFDYMIKLGHKPDDRCTASMISAYEKKNYLDNALNLLLELEKDGFEPGVATYSVLVDWLGKLQLVDEAEQLLGKIALLGEAPPFKLQVSLCDMYARAGNEKKALQSLGVLEARKDELGQAEFERILSGLIDGGFQKDAQRISQIMEAQGFDASRVKFKLSKPVSRAPSFR* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0628 689 MobiDBLite consensus disorder prediction 42 73 - -
Gso14g0628 689 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 532 566 IPR002885 -
Gso14g0628 689 TIGRFAM PPR: pentatricopeptide repeat domain 357 388 IPR002885 -
Gso14g0628 689 TIGRFAM PPR: pentatricopeptide repeat domain 426 456 IPR002885 -
Gso14g0628 689 Coils Coil 363 383 - -
Gso14g0628 689 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 353 387 IPR002885 -
Gso14g0628 689 PANTHER OS07G0661900 PROTEIN 12 684 IPR044657 -
Gso14g0628 689 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 388 422 IPR002885 -
Gso14g0628 689 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 5, MITOCHONDRIAL 12 684 - -
Gso14g0628 689 Pfam PPR repeat 357 385 IPR002885 -
Gso14g0628 689 Pfam PPR repeat 538 564 IPR002885 -
Gso14g0628 689 Pfam PPR repeat 426 453 IPR002885 -
Gso14g0628 689 Pfam PPR repeat 570 594 IPR002885 -
Gso14g0628 689 Gene3D Tetratricopeptide repeat domain 304 415 IPR011990 GO:0005515
Gso14g0628 689 Gene3D Tetratricopeptide repeat domain 416 490 IPR011990 GO:0005515
Gso14g0628 689 Gene3D Tetratricopeptide repeat domain 491 680 IPR011990 GO:0005515
Gso14g0628 689 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 423 457 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0628 Gso-Chr14 6163129 6165819 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0628 14 6163129 6165819 Gso17g2125 17 40960740 40963536 GST