Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0619 ATGGATGCAATTATTGCAACCCTGAATGCCAGAGCTAATCTAGTCACTAAGGGAATTGGATCTAGAAACAGAAGTTCTTCTGGGTTCTGGGGTGAGAACACAAGGGGAAGCCTTAACATCAGGTTTTGTAGTACTCCACGCAAGAGTTTAAAAGCTACAACTTTCAAGCCTGGCTTTGCACAAGCTGTTTACACACCAGACGTGAACAAAGAGCCACAGATATTCCAGGGACCCATTTTTCAGAGTCCAAAAGCAAACCCGGAAAATGTAGTTGCTATCATATTGGGTGGTGGTGCTGGAACTCGACTCTTTCCTCTTACTAGCACAAGAGCTAAGCAAGCGGTTCCAATTGCAGGGTGTTATAGACTCATAGATATTCCTATGAGCAATTGCATCAACAGTGGCATCAGAAAAGTGTACGTTTTAACACAGTTCAACTCTTTCTCCCTCAATGGCCACTTATCTCGCACTTACAATTTTGGAAATGGGGTGAACTTTGGAGGTGGTTTTGTGGAGGTCTTGGCTGCTACTCTAACTAATGGAGAGGCTGGGAATAAATGGTTCCAAGGGACAGCTGATGCAGTGCGACGATTTAGTTGGGTTTTTGAGGATGCCAAGAACAAGAATATTGAGCACATCTTGATCATTTCTGGTGATCATCTTTGCCGGATGGACTATATGAAGCTTGTGGAGAAACATATTGGGACAAATGCTGATATCACAGTTTCATGTGTGCCTATGGATGAAAGCCGTGCATCAGACTACGAGCTGATGAAAATTGATAGAAAGGGAGAGATTACCCAGTTTGTAGAAAAACCAGAAGGATCAGATTTGAAGGCAATGCATGTTGATACCACTCTCCTAGGCTTAACAGCAGAAGAAGCACAGACATATCCTTACATTGCACCCATGGGTGTTTCTGTATTCAGAACTGAGACCCTACTGAAACTGTTAAGATGGAGCTGTCCTTCTTGCAATGACTTTGGATCTGAAATTATCCCATCTGCTTTGAGGGACCACAAAGTCCAAGCATATATGTTCAGGGACTACTGGAAAGATATTGGAACTATAAAGTCCTTCTTTGAAGCCAATCTGGAACTAACAAAACAGTCTCCAAATTTTGAATTCTATGATCAAGAGTCGCCTTTCTTCACTTCCCCAAGATTCCTACCACCCACTAAAGCAATAAAGTGCAAGATTGTGGATGCAATTATTTCTCATGGTTGCTTCTTGAGTGAGTGTAGAGTTCAACATTCTATTGTTGGTGTGCGATCACGTTTAGAATCTGGTTCAGAGCTTCAGGATACCATGATGATGGGTGCTGACTACTATCAAACTGATTCTGAAATTGCAACTCTGCTGAAGGAAGGAAAGGTTCCAATAGGTGTTGGAGAGAATACTAAAATCAGGAATTGTATTATCGACAAGAATGCCAGGATAGGAAGAAATGTGATTATAGCCAATACTGATGGTGTTCAAGAAGCAGACAGGCCTATGGAAGGATTCTATATTAGGTCAGGCATCGTAGTTGTAGCGAATAATGCAACAATTGAAGATGGAACAGTCATTTGA 1572 0.4186 MDAIIATLNARANLVTKGIGSRNRSSSGFWGENTRGSLNIRFCSTPRKSLKATTFKPGFAQAVYTPDVNKEPQIFQGPIFQSPKANPENVVAIILGGGAGTRLFPLTSTRAKQAVPIAGCYRLIDIPMSNCINSGIRKVYVLTQFNSFSLNGHLSRTYNFGNGVNFGGGFVEVLAATLTNGEAGNKWFQGTADAVRRFSWVFEDAKNKNIEHILIISGDHLCRMDYMKLVEKHIGTNADITVSCVPMDESRASDYELMKIDRKGEITQFVEKPEGSDLKAMHVDTTLLGLTAEEAQTYPYIAPMGVSVFRTETLLKLLRWSCPSCNDFGSEIIPSALRDHKVQAYMFRDYWKDIGTIKSFFEANLELTKQSPNFEFYDQESPFFTSPRFLPPTKAIKCKIVDAIISHGCFLSECRVQHSIVGVRSRLESGSELQDTMMMGADYYQTDSEIATLLKEGKVPIGVGENTKIRNCIIDKNARIGRNVIIANTDGVQEADRPMEGFYIRSGIVVVANNATIEDGTVI* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0619 523 SUPERFAMILY Nucleotide-diphospho-sugar transferases 89 484 IPR029044 -
Gso14g0619 523 SUPERFAMILY Trimeric LpxA-like enzymes 386 523 IPR011004 -
Gso14g0619 523 Pfam Nucleotidyl transferase 92 369 IPR005835 GO:0009058|GO:0016779
Gso14g0619 523 CDD ADP_Glucose_PP 92 354 - -
Gso14g0619 523 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 3, CHLOROPLASTIC 1 523 - -
Gso14g0619 523 Gene3D Hexapeptide repeat proteins 389 523 - -
Gso14g0619 523 CDD LbH_G1P_AT_C 391 517 - -
Gso14g0619 523 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 79 388 IPR029044 -
Gso14g0619 523 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 1 523 IPR011831 GO:0005978|GO:0008878
Gso14g0619 523 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 187 195 IPR005836 GO:0005978|GO:0008878
Gso14g0619 523 TIGRFAM glgC: glucose-1-phosphate adenylyltransferase 90 487 IPR011831 GO:0005978|GO:0008878
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0619 Gso-Chr14 6083866 6088554 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0619 14 6083866 6088554 Gso17g2134 17 41028947 41033217 GST
Gso14g0619 14 6083866 6088554 Gso4g0267 4 2449542 2454475 PCT
Gso14g0619 14 6083866 6088554 Gso6g0246 6 2382492 2386960 PCT
Gso4g0267 4 2449542 2454475 Gso14g0619 14 6083866 6088554 PCT
Gso6g0246 6 2382492 2386960 Gso14g0619 14 6083866 6088554 PCT