Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g1899 ATGGGGTTCTTAAACGTAGAGAAGAAATGGTTATATCCTTTCATAGTGTGTTTTGCCATATGCATGCTCTTACTAGTCTCATCCTTCAACATGGATCTTGTCTCTTCAATTCACTCCATCAATTCACTGTTTTTCTTTCTCCCATCTCATTTACGCCCAAACCAAACTGAGCCGGGTTTTGTGGAGAGGAAGGCTTCTCCTGCTCCAGCGCCGGCTAGGCCTGTGCTTCCTCGTTTCGCTTATTTGATTTCAGGCTCCAAAGGTGATTTGGAAAAGCTTTGGAGAACCCTTCATGCACTTTATCATCCCCTAAACCATTATGTTGTTCATATGGACCTTGAGTCGCCGCTTGAGGAAAGGATGGAGATTGCACATAGAATTGAAAGACAACATGTCTTCGCTGAGGTTGGAAACGTTTTTGTAATCACAAAGGCTAACATGGTCACTTACCGAGGACCAACGATGGTTGCTAATACTCTTCATGCTTGTGCCATTCTGCTCAAGAGAAGTAAAGACTGGGATTGGTTTATTAATCTTAGTGCTTCAGACTATCCTCTTGTGACACAGGATGATTTAGATAGAGGCCTTAACTTCATTGAGCACACAAGTCGGTTAGGGTGGAAGTTTGATAAACGAGCAATGCCTTTAATTGTAGACCCTGGGCTTTACATGTCAACCAAATCTGATGTATTTTGGGTCAATCCAAAGAGACCTTTGCCAACAGCATTTAAATTATTCACTGGTTCAGCATGGACGGTATTATCACACGACTTTGTTGAATATATTGTATGGGGATGGGACAATCTGCCAAGGACCCTTCTCATGTACTACACTAATTTTCTGTCTTCCCCTGAAGGCTACTTCCAGACTGTTGCATGCAATGCGCCAGAATGGGCTAAAACCCTTGTCAATAGTGACTTGCATTACATTGCCTGGGATGTCCCTCCTAAACAGCACCCTCACGTCCTTAACATCAACGACACAGACAAAATGGTTGAAAGTGGTGCTGCCTTTGCAAGAAAATTTAAGCAAGATGATCCAGCCTTGGATTGGATTGATAAAATGATTCTCCGCAAGAGAAATGGACTATTTCCACTCGGTGGTTGGTGCACCGGCAGACCCAAATGCTCCGAGATTGGGAACATTTATAAACTCAAACCTGGTCCGGGATCTCAAAGGCTTCATCGCCTTGTCGCGGGGCTAACTTTGAAGGCTAAATCTGGTGAGGATCAGTGTAAATAG 1242 0.4364 MGFLNVEKKWLYPFIVCFAICMLLLVSSFNMDLVSSIHSINSLFFFLPSHLRPNQTEPGFVERKASPAPAPARPVLPRFAYLISGSKGDLEKLWRTLHALYHPLNHYVVHMDLESPLEERMEIAHRIERQHVFAEVGNVFVITKANMVTYRGPTMVANTLHACAILLKRSKDWDWFINLSASDYPLVTQDDLDRGLNFIEHTSRLGWKFDKRAMPLIVDPGLYMSTKSDVFWVNPKRPLPTAFKLFTGSAWTVLSHDFVEYIVWGWDNLPRTLLMYYTNFLSSPEGYFQTVACNAPEWAKTLVNSDLHYIAWDVPPKQHPHVLNINDTDKMVESGAAFARKFKQDDPALDWIDKMILRKRNGLFPLGGWCTGRPKCSEIGNIYKLKPGPGSQRLHRLVAGLTLKAKSGEDQCK* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g1899 413 PANTHER OS01G0201100 PROTEIN 4 413 - -
Gso12g1899 413 Pfam Core-2/I-Branching enzyme 79 331 IPR003406 GO:0016020|GO:0016757
Gso12g1899 413 PANTHER GLYCOSYLTRANSFERASE 4 413 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g1899 Gso-Chr12 42840352 42843941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g1899 1 413 Glycosyltransferase AT3G15350 63.443 0.0 574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1899 12 42840352 42843941 Gso6g2026 6 36345303 36349524 PCT
Gso6g2026 6 36345303 36349524 Gso12g1899 12 42840352 42843941 PCT